RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DENND3A2RUS2 1198 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 ERLIN2O94905 339 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 ZNF202O95125 648 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 NPTX2P47972 431 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 EFNA5P52803 228 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 TCTN1Q2MV58 587 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 TMEM87AQ8NBN3 555 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 NTPCRQ9BSD7 190 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRO3102Q9H379 93 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 PARVGQ9HBI0 331 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 CHST12Q9NRB3 414 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
NCKIPSD-207ENST00000453349 SIP14410 1827 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 H0YCG3 227 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 K7ERI5 159 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 ENPP3O14638 875 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 AMHP03971 560 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 IDEP14735 1019 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 AXLP30530 894 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 AFMP43652 599 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 MAPK6Q16659 721 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 CDCA2Q69YH5 1023 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 KANK3Q6NY19 840 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 CCDC65Q8IXS2 484 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 SPIRE2Q8WWL2 714 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 C7orf25Q9BPX7 421 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 TMEM134Q9H6X4 195 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 MINDY3Q9H8M7 445 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRMT7Q9NVM4 692 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 PHLPP2Q6ZVD8 1323 aa16.12■□□□□ 0.17
NCKIPSD-207ENST00000453349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 GOLGA6L22H0YM25 854 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLC16A4O15374 487 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 ACTN4O43707 911 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 TRAK2O60296 914 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 GAP43P17677 238 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 LIG1P18858 919 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 ZNF131P52739 623 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 WDR5P61964 334 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 UBE2HP62256 183 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 PHOSPHO2Q8TCD6 241 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 DNAJC19Q96DA6 116 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 PAGE5Q96GU1 130 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 ADAM2Q99965 735 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 TRIM9Q9C026 710 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 TMX1Q9H3N1 280 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 RGS18Q9NS28 235 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 C1orf112Q9NSG2 853 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 DACT1Q9NYF0 836 aa16.11■□□□□ 0.17
NCKIPSD-207ENST00000453349 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 MYL1P05976 194 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 SCP2P22307 547 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 ABCD1P33897 745 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 ASIC1P78348 528 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 STRN3Q13033 797 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 FAM187BQ17R55 369 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 HERC4Q5GLZ8 1057 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 RASIP1Q5U651 963 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 CNNM4Q6P4Q7 775 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 RTN4RL1Q86UN2 441 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 FAM178BQ8IXR5 827 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 FMR1NBQ8N0W7 255 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRIMPOLQ96LW4 560 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLC9A7Q96T83 725 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 FZD8Q9H461 694 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 AGPAT5Q9NUQ2 364 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 SEL1LQ9UBV2 794 aa16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
NCKIPSD-207ENST00000453349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRKCBP05771 671 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 SKIP12755 728 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 ATP2A2P16615 1042 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 DSC3Q14574 896 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLC24A5Q71RS6 500 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 HAUS6Q7Z4H7 955 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 MYOCDQ8IZQ8 938 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 ENGASEQ8NFI3 743 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 KIFC3Q9BVG8 833 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms