RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SMTNP53814 917 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 ERVK-21P61565 698 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 FAM189BP81408 668 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 GRB10Q13322 594 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 MAPK6Q16659 721 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 TMEM119Q4V9L6 283 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 RINT1Q6NUQ1 792 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 APBB1IPQ7Z5R6 666 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 ASAP3Q8TDY4 903 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 PLIN2Q99541 437 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 CSRNP2Q9H175 543 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 PRDM12Q9H4Q4 367 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 GPRC5CQ9NQ84 441 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 PRMT7Q9NVM4 692 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 STK17AQ9UEE5 414 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 LCHNA4D1U4 455 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 MGEA5O60502 916 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 RB1P06400 928 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 IGFBP4P22692 258 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 ECHDC2Q86YB7 292 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 MYLIPQ8WY64 445 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 ZNF689Q96CS4 500 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
SMPD4-212ENST00000451542 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 TFIP11Q9UBB9 837 aaKnown RBP13.31□□□□□ -0.28
SMPD4-212ENST00000451542 CCDC169A6NNP5 214 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 TBKBP1A7MCY6 615 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 H0YCG3 227 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 K7ERI5 159 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 ZNF623O75123 536 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 PLCG1P19174 1290 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 SCP2P22307 547 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 KRT85P78386 507 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 NUCB2P80303 420 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 MBTD1Q05BQ5 628 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
SMPD4-212ENST00000451542 PTPROQ16827 1216 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 TMEM192Q8IY95 271 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 LARP4BQ92615 738 aaKnown RBP13.3□□□□□ -0.28
SMPD4-212ENST00000451542 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
SMPD4-212ENST00000451542 ADPGKQ9BRR6 497 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 C11orf84Q9BUA3 381 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-212ENST00000451542 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 CERS4Q9HA82 394 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 MYH15Q9Y2K3 1946 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
SMPD4-212ENST00000451542 MYH11P35749 1972 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 TSPAN1O60635 241 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 CUTAO60888 179 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 HIP1RO75146 1068 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 TBCAO75347 108 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 BRD1O95696 1058 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 NCLP19338 710 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 ABCD1P33897 745 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 CTNNB1P35222 781 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 DDIT3P35638 169 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 STAT6P42226 847 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 ME1P48163 572 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 SLC12A3P55017 1021 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PEX3P56589 373 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 GRIN1Q05586 938 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PRPF4BQ13523 1007 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 FAM187BQ17R55 369 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PAN2Q504Q3 1202 aaKnown RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-212ENST00000451542 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 GPBP1Q86WP2 473 aa13.29□□□□□ -0.28
SMPD4-212ENST00000451542 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms