RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 KANSL3Q9P2N6 904 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 DBR1Q9UK59 544 aaKnown RBP17.86■□□□□ 0.45
SGCE-208ENST00000450385 LAD1O00515 517 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 SRGAP2CP0DJJ0 459 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 RPA1P27694 616 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 MCM7P33993 719 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 ALDH7A1P49419 539 aaKnown RBP17.85■□□□□ 0.45
SGCE-208ENST00000450385 GATMP50440 423 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 CYP4A11Q02928 519 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 KCNT2Q6UVM3 1135 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 GLB1LQ6UWU2 654 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 MRPL10Q7Z7H8 261 aaKnown RBP17.85■□□□□ 0.45
SGCE-208ENST00000450385 FAM178BQ8IXR5 827 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 MCPH1Q8NEM0 835 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
SGCE-208ENST00000450385 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 C1QTNF1Q9BXJ1 281 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 RAB34Q9BZG1 259 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 SPG21Q9NZD8 308 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 CNTNAP2Q9UHC6 1331 aa17.85■□□□□ 0.45
SGCE-208ENST00000450385 PIN4Q9Y237 131 aaKnown RBP17.85■□□□□ 0.45
SGCE-208ENST00000450385 DNAJB1P25685 340 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 LTBRP36941 435 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 RARRES1P49788 294 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 PTENP60484 403 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 CLLU1OSQ5K130 101 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 HAUS3Q68CZ6 603 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 KSR1Q8IVT5 923 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
SGCE-208ENST00000450385 RNF149Q8NC42 400 aa17.84■□□□□ 0.45
SGCE-208ENST00000450385 DTNBO60941 627 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 EYA4O95677 639 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 OR52Z1P0C646 297 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 SRGAP2BP0DMP2 458 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 ATF7P17544 494 aaPredicted RBP17.83■□□□□ 0.44
SGCE-208ENST00000450385 FGFR4P22455 802 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 ARL2P36404 184 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.44
SGCE-208ENST00000450385 GUCY1B3Q02153 619 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 LRRC55Q6ZSA7 311 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 KCTD17Q8N5Z5 321 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 MICAL1Q8TDZ2 1067 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 ZNF668Q96K58 619 aaPredicted RBP17.83■□□□□ 0.44
SGCE-208ENST00000450385 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
SGCE-208ENST00000450385 TMEM60Q9H2L4 133 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 TLE6Q9H808 572 aa17.83■□□□□ 0.44
SGCE-208ENST00000450385 RBAK-RBAKDNI3L0D1 243 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 FSCN2O14926 492 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 CSDE1O75534 798 aaKnown RBP17.82■□□□□ 0.44
SGCE-208ENST00000450385 ERLIN2O94905 339 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 SPATA31C1P0DKV0 1188 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 IBSPP21815 317 aaPredicted RBP17.82■□□□□ 0.44
SGCE-208ENST00000450385 HOXA11P31270 313 aaPredicted RBP17.82■□□□□ 0.44
SGCE-208ENST00000450385 TECP42680 631 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 COASYQ13057 564 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 GIT2Q14161 759 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 SMAD2Q15796 467 aaKnown RBP17.82■□□□□ 0.44
SGCE-208ENST00000450385 NOMO2Q5JPE7 1267 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 NOTUMQ6P988 496 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 TMEM184AQ6ZMB5 413 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 CATSPER3Q86XQ3 398 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 RNF169Q8NCN4 708 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 PCDHB2Q9Y5E7 798 aa17.82■□□□□ 0.44
SGCE-208ENST00000450385 ZBTB39O15060 712 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
SGCE-208ENST00000450385 ATP2B1P20020 1258 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 PRPHP41219 470 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 SMAD4Q13485 552 aaKnown RBP17.81■□□□□ 0.44
SGCE-208ENST00000450385 ZNF174Q15697 407 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 EP400NLQ6ZTU2 488 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 HACE1Q8IYU2 909 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 HELQQ8TDG4 1101 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 MSLNLQ96KJ4 702 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 XPNPEP1Q9NQW7 623 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 CD207Q9UJ71 328 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 C5orf42Q9H799 3197 aa17.81■□□□□ 0.44
SGCE-208ENST00000450385 ZMYM2Q9UBW7 1377 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 POTEMA6NI47 508 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
SGCE-208ENST00000450385 WNT7AO00755 349 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 OFD1O75665 1012 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 NDUFV1P49821 464 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 FOSBP53539 338 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 BCAR1P56945 870 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 ADHFE1Q8IWW8 467 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 GJD3Q8N144 294 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 C4orf32Q8N8J7 132 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 IGFLR1Q9H665 355 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 MINDY3Q9H8M7 445 aa17.8■□□□□ 0.44
SGCE-208ENST00000450385 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
SGCE-208ENST00000450385 INPPL1O15357 1258 aa17.79■□□□□ 0.44
SGCE-208ENST00000450385 ALADP13716 330 aa17.79■□□□□ 0.44
SGCE-208ENST00000450385 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms