RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 MLXIPLQ9NP71 852 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 LNPEPQ9UIQ6 1025 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 POTEFA5A3E0 1075 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 RNMTO43148 476 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 MARK3P27448 753 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 PPP1R2P41236 205 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 CDK7P50613 346 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 FOXO4P98177 505 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 DR1Q01658 176 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SULT2A1Q06520 285 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 PKN1Q16512 942 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 DUPD1Q68J44 220 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 TSHZ1Q6ZSZ6 1077 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 OTUD6AQ7L8S5 288 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ANKRD42Q8N9B4 389 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 LRRC57Q8N9N7 239 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZNF184Q99676 751 aaPredicted RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZKSCAN3Q9BRR0 538 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ERP44Q9BS26 406 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ALG2Q9H553 416 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 CEP72Q9P209 647 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 HSFX1Q9UBD0 423 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ADAMTS1Q9UHI8 967 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 AFDNP55196 1824 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 RGPD2P0DJD1 1756 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 TRPM3Q9HCF6 1732 aaPredicted RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 PASKQ96RG2 1323 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 TRAFD1O14545 582 aaPredicted RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 CAPN9O14815 690 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 GFPT2O94808 682 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 CYP11B2P19099 503 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ADORA1P30542 326 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ADD2P35612 726 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 RCAN1P53805 252 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 YARSP54577 528 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 CASP7P55210 303 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SLC34A1Q06495 639 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 AP1B1Q10567 949 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 STK4Q13043 487 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 TMED1Q13445 227 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SLC4A8Q2Y0W8 1093 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 UBAP2Q5T6F2 1119 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 ARL6IP4Q66PJ3 421 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 OLFML2BQ68BL8 750 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZNF449Q6P9G9 518 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 VSTM1Q6UX27 236 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 C4orf50Q6ZRC1 276 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZNF554Q86TJ5 538 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SPATA24Q86W54 205 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ZNF654Q8IZM8 581 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 FBXO25Q8TCJ0 367 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 USP40Q9NVE5 1235 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SPATA7Q9P0W8 599 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 SUN2Q9UH99 717 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 BARX2Q9UMQ3 279 aaPredicted RBP9.26□□□□□ -0.93
LSM5-208ENST00000450169 SH3GLB1Q9Y371 365 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ATRNO75882 1429 aa9.26□□□□□ -0.93
LSM5-208ENST00000450169 ABCB11O95342 1321 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 A0A0J9YVX5 310 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 hCG_1642624A0A1W2PR95 340 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 GH1P01241 217 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 FGFR4P22455 802 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 STX2P32856 288 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 TRAPPC10P48553 1259 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 HSPA2P54652 639 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PTENP60484 403 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PHEXP78562 749 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 HPCAP84074 193 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PLOD1Q02809 727 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 BTG3Q14201 252 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 DDB1Q16531 1140 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 MFSD4BQ5TF39 518 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 MARK2Q7KZI7 788 aaKnown RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 HS2ST1Q7LGA3 356 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PEX26Q7Z412 305 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 NAT14Q8WUY8 206 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 WDR60Q8WVS4 1066 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ARHGEF2Q92974 986 aaKnown RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 CATSPER2Q96P56 530 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 TUBGCP5Q96RT8 1024 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ASCC2Q9H1I8 757 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 KCNK9Q9NPC2 374 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 IL1RAPL1Q9NZN1 696 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 CHKBQ9Y259 395 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 DAAM1Q9Y4D1 1078 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 MAPK13O15264 365 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 RIPK2O43353 540 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms