RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 SYCE2Q6PIF2 218 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 PRPF31Q8WWY3 499 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 SUSD6Q92537 303 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TMEM143Q96AN5 459 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 NAP1L4Q99733 375 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 IFT122Q9HBG6 1241 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 BMP2KQ9NSY1 1161 aaPredicted RBP18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 FAM105AQ9NUU6 356 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 INPP5FQ9Y2H2 1132 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 COL4A3BPQ9Y5P4 624 aa18.55■□□□□ 0.56
RAB11FIP3-204ENST00000449879 FAM205CA6NFA0 338 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 MEIS3P2A8K0S8 358 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TBX3O15119 743 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 CXCL14O95715 111 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 CBX2Q14781 532 aaPredicted RBP18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 EPHA7Q15375 998 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 GLB1LQ6UWU2 654 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 EXOC8Q8IYI6 725 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 WASF1Q92558 559 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 LXNQ9BS40 222 aa18.54■□□□□ 0.56
RAB11FIP3-204ENST00000449879 C2orf71A6NGG8 1288 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 ZBTB39O15060 712 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 ZNF623O75123 536 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 FDPSP14324 419 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 HOXB8P17481 243 aaPredicted RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 YWHABP31946 246 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 RAB27AP51159 221 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 CYP4A11Q02928 519 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 RNASELQ05823 741 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 NR5A1Q13285 461 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 CTTNQ14247 550 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 NOMO2Q5JPE7 1267 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 OTUD6AQ7L8S5 288 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 VPS52Q8N1B4 723 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 PSPC1Q8WXF1 523 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 DYDC2Q96IM9 177 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 MFSD14AQ96MC6 490 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 GBP3Q9H0R5 595 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 DHX33Q9H6R0 707 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 NRDE2Q9H7Z3 1164 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TBC1D13Q9NVG8 400 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 PCDHB2Q9Y5E7 798 aa18.53■□□□□ 0.56
RAB11FIP3-204ENST00000449879 OFD1O75665 1012 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 SP100P23497 879 aaPredicted RBP18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 KRT2P35908 639 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 RFC5P40937 340 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 LAMTOR4Q0VGL1 99 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 XKR9Q5GH70 373 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TRIM67Q6ZTA4 783 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 SRGAP1Q7Z6B7 1085 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TMEM173Q86WV6 379 aaPredicted RBP18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TPH2Q8IWU9 490 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 SLFN12Q8IYM2 578 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TMEM87AQ8NBN3 555 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 CASP10Q92851 521 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 PGBD4Q96DM1 585 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 ZSWIM4Q9H7M6 989 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 MINDY3Q9H8M7 445 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 BRMS1Q9HCU9 246 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 AGPAT5Q9NUQ2 364 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 PPME1Q9Y570 386 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
RAB11FIP3-204ENST00000449879 TRIOO75962 3097 aa18.52■□□□□ 0.55
RAB11FIP3-204ENST00000449879 CLASP2O75122 1294 aaKnown RBP18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 GALTP07902 379 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 ZXDAP98168 799 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 SPIRE1Q08AE8 756 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 EMC2Q15006 297 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 ME3Q16798 604 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 RNF149Q8NC42 400 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 TCP11Q8WWU5 503 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 AUTS2Q8WXX7 1259 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 RSPH1Q8WYR4 309 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 PBXIP1Q96AQ6 731 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 IGSF21Q96ID5 467 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 FBXL18Q96ME1 805 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 CDH22Q9UJ99 828 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 PIEZO1Q92508 2521 aa18.51■□□□□ 0.55
RAB11FIP3-204ENST00000449879 ZNF318Q5VUA4 2279 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 TMEM221A6NGB7 291 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 M0R296 226 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 ASAP2O43150 1006 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 SLITRK3O94933 977 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 LARGE1O95461 756 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 CES5AQ6NT32 575 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 AGMOQ6ZNB7 445 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 DDX53Q86TM3 631 aaKnown RBP18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 ZNF280BQ86YH2 543 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 DNAJB4Q9UDY4 337 aa18.5■□□□□ 0.55
RAB11FIP3-204ENST00000449879 PCDHA12Q9UN75 941 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms