RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 ELAC1Q9H777 363 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 RNF19AQ9NV58 838 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 MTMR6Q9Y217 621 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 A0A0U1RQF3 1178 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 E9PMD0 336 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 H3BNC9 293 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 HOXA2O43364 376 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 STX6O43752 255 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 BMP15O95972 392 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 BMPR1AP36894 532 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 MBTD1Q05BQ5 628 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 KCNK18Q7Z418 384 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 ZNF598Q86UK7 904 aaKnown RBP13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 ABI1Q8IZP0 508 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 BSNDQ8WZ55 320 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 TMEM117Q9H0C3 514 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 FAM105AQ9NUU6 356 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 THEGQ9P2T0 379 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 MYH11P35749 1972 aa13.23□□□□□ -0.29
LSP1P3-201ENST00000449530 C5orf67F2Z3F1 127 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 TSPAN1O60635 241 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 EYA4O95677 639 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 CYP11B2P19099 503 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 RAB27AP51159 221 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 MRPS5P82675 430 aaKnown RBP13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 PTPROQ16827 1216 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 LRRC43Q8N309 656 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 LPPQ93052 612 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 CPB2Q96IY4 423 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 CDK5RAP3Q96JB5 506 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 PNMA5Q96PV4 448 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 PLIN2Q99541 437 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 C1QTNF1Q9BXJ1 281 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
LSP1P3-201ENST00000449530 MEIS3P2A8K0S8 358 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 GRM6O15303 877 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 B4GALT5O43286 388 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 EOMESO95936 686 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 RB1P06400 928 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 SKIP12755 728 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 GRIN1Q05586 938 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 TIGD5Q53EQ6 642 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 CABP7Q86V35 215 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 MRPL38Q96DV4 380 aaKnown RBP13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 PLVAPQ9BX97 442 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.29
LSP1P3-201ENST00000449530 NCOR1O75376 2440 aa13.21□□□□□ -0.3
LSP1P3-201ENST00000449530 BDP1A6H8Y1 2624 aa13.21□□□□□ -0.3
LSP1P3-201ENST00000449530 LAG3P18627 525 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 LIG1P18858 919 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 PTPAQ15257 358 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 AMHR2Q16671 573 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 TMEM119Q4V9L6 283 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 HYIQ5T013 277 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 RASSF8Q8NHQ8 419 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 KIFAP3Q92845 792 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 AK8Q96MA6 479 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 CWH43Q9H720 699 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
LSP1P3-201ENST00000449530 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms