RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SEC31AO94979 1220 aaKnown RBP17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 MYBPC2Q14324 1141 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 KCTD2Q14681 263 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 PPP2R5AQ15172 486 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 MTERF2Q49AM1 385 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 RNF10Q8N5U6 811 aaKnown RBP17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 MSANTD4Q8NCY6 345 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 ZSWIM2Q8NEG5 633 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 ACCSQ96QU6 501 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 MMS19Q96T76 1030 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 XPNPEP1Q9NQW7 623 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 ZNF302Q9NR11 478 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 CYP26B1Q9NR63 512 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 FAM53CQ9NYF3 392 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
AP000253.1-201ENST00000449339 CCDC151A5D8V7 595 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 FARP2O94887 1054 aaPredicted RBP17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 ATG7O95352 703 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 ARIH2O95376 493 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 RHOXF2BP0C7M4 288 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 NPTX2P47972 431 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 NCKAP1LP55160 1127 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 NOX5Q96PH1 765 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 RHOXF2Q9BQY4 288 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 CBWD1Q9BRT8 395 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 ARFGAP3Q9NP61 516 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 AJAP1Q9UKB5 411 aaPredicted RBP17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 GSTTP1A0A1W2PQM5 241 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 DKC1O60832 514 aaKnown RBP eCLIP17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 PNMA6AP0CW24 399 aaPredicted RBP17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 JAM2P57087 298 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 GTF2BQ00403 316 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 BFSP1Q12934 665 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 CBWD6Q4V339 395 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 CBWD3Q5JTY5 395 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 CBWD5Q5RIA9 395 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 GJB7Q6PEY0 223 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 MS4A4AQ96JQ5 239 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 PNKPQ96T60 521 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 PCYT2Q99447 389 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
AP000253.1-201ENST00000449339 DNAJC25-GNG10A0A024R161 153 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 PDHXO00330 501 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 ZNF185O15231 689 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 BUB1O43683 1085 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 GGPS1O95749 300 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 CKAP4Q07065 602 aaKnown RBP17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 BRD3Q15059 726 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 IQCEQ6IPM2 695 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 ZNF571Q7Z3V5 609 aaPredicted RBP17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 KRT222Q8N1A0 295 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 TMEM161BQ8NDZ6 487 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 RPGRIP1Q96KN7 1286 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 ST6GALNAC4Q9H4F1 302 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 MAFBQ9Y5Q3 323 aaPredicted RBP17.52■□□□□ 0.4
AP000253.1-201ENST00000449339 CCL15-CCL14A0A0B4J2E2 113 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 BTBD19C9JJ37 291 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 PRKCIP41743 596 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 NAP1L1P55209 391 aaKnown RBP17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 CCL15Q16663 113 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 XKR3Q5GH77 459 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 TMEM63BQ5T3F8 832 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 BRI3BPQ8WY22 251 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 GBA2Q9HCG7 927 aaPredicted RBP17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 RAB21Q9UL25 225 aa17.52■□□□□ 0.39
AP000253.1-201ENST00000449339 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 PRLRP16471 622 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 NAB2Q15742 525 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 MROH8Q9H579 483 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 KMT5AQ9NQR1 393 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 ANKRD63C9JTQ0 380 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 DGAT1O75907 488 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 CELF2O95319 508 aaKnown RBP17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 OATP04181 439 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 KLRC1P26715 233 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 COPB2P35606 906 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 INTS8Q75QN2 995 aaKnown RBP17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 C12orf56Q8IXR9 622 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 SLC17A8Q8NDX2 589 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 KIFAP3Q92845 792 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 PACSIN1Q9BY11 444 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 ATP6V0A4Q9HBG4 840 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 TBX20Q9UMR3 447 aa17.51■□□□□ 0.39
AP000253.1-201ENST00000449339 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 DENND3A2RUS2 1198 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 ATP8B1O43520 1251 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 TBC1D8O95759 1140 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 CETPP11597 493 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 KRT13P13646 458 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms