RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SLC28A3Q9HAS3 691 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 POLD4Q9HCU8 107 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 CHST12Q9NRB3 414 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 BLOC1S4Q9NUP1 217 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 PCDHA7Q9UN72 937 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 INSL6Q9Y581 213 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 PCDHB7Q9Y5E2 793 aa15.51■□□□□ 0.07
GTF3C3-206ENST00000448539 CCDC169A6NNP5 214 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 MGEA5O60502 916 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 SARSP49591 514 aaKnown RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 RAD51AP2Q09MP3 1159 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 DMP1Q13316 513 aaPredicted RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 TWF2Q6IBS0 349 aaKnown RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 RTN4RL1Q86UN2 441 aaPredicted RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 NPAS4Q8IUM7 802 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 PDILTQ8N807 584 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 LEO1Q8WVC0 666 aaPredicted RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 LINC01599Q8WXQ3 324 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 MINDY3Q9H8M7 445 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 C17orf75Q9HAS0 396 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 KCNG1Q9UIX4 513 aa15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
GTF3C3-206ENST00000448539 TMEM265A0A087WTH1 108 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 MYOGP15173 224 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 LIG1P18858 919 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 AXLP30530 894 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 PEX3P56589 373 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 DSC3Q14574 896 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 TMEM132AQ24JP5 1023 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 AXDND1Q5T1B0 1012 aaPredicted RBP15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 PPP2R2DQ66LE6 453 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 SHC4Q6S5L8 630 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 SV2BQ7L1I2 683 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 YBX2Q9Y2T7 364 aaKnown RBP15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
GTF3C3-206ENST00000448539 MICAL3Q7RTP6 2002 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 NPHP3-ACAD11A0A0J9YXS1 232 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 C9IYK1 514 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 TBCAO75347 108 aaKnown RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 FAM13AO94988 1023 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 CA3P07451 260 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 SKIP12755 728 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 EFNA5P52803 228 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 SMTNP53814 917 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 MAPK6Q16659 721 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 CDCA2Q69YH5 1023 aaPredicted RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 PYM1Q9BRP8 204 aaKnown RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 TTYH1Q9H313 450 aaPredicted RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 PRMT7Q9NVM4 692 aaPredicted RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 LARSQ9P2J5 1176 aaKnown RBP15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 ODF2LQ9ULJ1 636 aa15.48■□□□□ 0.07
GTF3C3-206ENST00000448539 PHLPP2Q6ZVD8 1323 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 SFI1A8K8P3 1242 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 TSPAN1O60635 241 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 PLS3P13797 630 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 NPTX2P47972 431 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 RAB27AP51159 221 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 FAM189BP81408 668 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 MAPK7Q13164 816 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 RESP18Q5W5W9 173 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 ADALQ6DHV7 355 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 NOTUMQ6P988 496 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 DAW1Q8N136 415 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 LRRC15Q8TF66 581 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 DHX58Q96C10 678 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 CCDC51Q96ER9 411 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 CDX2Q99626 313 aaPredicted RBP15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 KIFC3Q9BVG8 833 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 CUEDC2Q9H467 287 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 ZHX3Q9H4I2 956 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 ZNF576Q9H609 170 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 ELAC1Q9H777 363 aaKnown RBP15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 TMEM161AQ9NX61 479 aa15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
GTF3C3-206ENST00000448539 A0A087X0B3 334 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 A0A0U1RQF3 1178 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 K7ERI5 159 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 DLL1O00548 723 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 HOXA2O43364 376 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 PRKCBP05771 671 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 HTRA4P83105 476 aaPredicted RBP15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 AMPD3Q01432 767 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 NAALADL2Q58DX5 795 aa15.46■□□□□ 0.07
GTF3C3-206ENST00000448539 DYMQ7RTS9 669 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms