RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 MAP3K7O43318 606 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 T-ENOLP0DO92 83 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 DEUP1Q05D60 604 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 C4orf50Q6ZRC1 276 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 HS2ST1Q7LGA3 356 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 DTX3LQ8TDB6 740 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 NRG4Q8WWG1 115 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 GREM2Q9H772 168 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 PPP1R9AQ9ULJ8 1098 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 PCDHA6Q9UN73 950 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 PCDHA8Q9Y5H6 950 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 MYH3P11055 1940 aa10.12□□□□□ -0.79
SYNPO2-204ENST00000448416 TJP1Q07157 1748 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 hCG_2014768A0A024R1R8 64 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 ETS2P15036 469 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 RXRBP28702 533 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 PTPN4P29074 926 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 IL9RQ01113 521 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC34A1Q06495 639 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 GIT2Q14161 759 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CADPS2Q86UW7 1296 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CENPKQ9BS16 269 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 KRT36O76013 467 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 MAGEA10P43363 369 aaPredicted RBP10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CDR2Q01850 454 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 RFWD3Q6PCD5 774 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 ISCA1Q9BUE6 129 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 TBK1Q9UHD2 729 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 COMMD3-BMI1R4GMX3 469 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 LYNP07948 512 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CYP7A1P22680 504 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 FOXN2P32314 431 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 NPEPPSP55786 919 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 LSAMPQ13449 338 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 MIGA2Q7L4E1 593 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 TRIM59Q8IWR1 403 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 SYNE4Q8N205 404 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 LARP4BQ92615 738 aaKnown RBP10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 STMN2Q93045 179 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 IWS1Q96ST2 819 aa10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 CDC42EP4Q9H3Q1 356 aaKnown RBP10.11□□□□□ -0.79
SYNPO2-204ENST00000448416 DDX3YO15523 660 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 NMT2O60551 498 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PHF2O75151 1096 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 GNA14O95837 355 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CHRNA3P32297 505 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PTGIRP43119 386 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 GALCP54803 685 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 GSTA3Q16772 222 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SH2D4BQ5SQS7 431 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PPP1R21Q6ZMI0 780 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TRMT10CQ7L0Y3 403 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SRRM1Q8IYB3 904 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 VGLL2Q8N8G2 317 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 NCSTNQ92542 709 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF510Q9Y2H8 683 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CCDC88AQ3V6T2 1871 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 FAM196BA6NMK8 535 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 HNRNPRO43390 633 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC9A1P19634 815 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CCNFP41002 786 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SH3BGRP55822 239 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CALCOCO2Q13137 446 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DNAJC3Q13217 504 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 RRP1BQ14684 758 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TNIP1Q15025 636 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 LIN52Q52LA3 116 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PHTF1Q9UMS5 762 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 STARD13Q9Y3M8 1113 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PASKQ96RG2 1323 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 UCHL3P15374 230 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 BPIFB4P59827 614 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 MAP7Q14244 749 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 Q4G0T1 1027 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC35G2Q8TBE7 412 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DDX12PQ92771 950 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 NR1H4Q96RI1 486 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF184Q99676 751 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 MIS12Q9H081 205 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SH3GLB2Q9NR46 395 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 BLOC1S4Q9NUP1 217 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PTPN22Q9Y2R2 807 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 FAM170AA1A519 330 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TBX10O75333 385 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TMCC1O94876 653 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms