RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TMEM173Q86WV6 379 aaPredicted RBP31.66■■■□□ 2.66
CBX4-202ENST00000448310 SLC7A3Q8WY07 619 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 TMEM143Q96AN5 459 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 LXNQ9BS40 222 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 RGL1Q9NZL6 768 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 INPP5FQ9Y2H2 1132 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 C2orf71A6NGG8 1288 aa31.65■■■□□ 2.66
CBX4-202ENST00000448310 DKC1O60832 514 aaKnown RBP eCLIP31.65■■■□□ 2.66
CBX4-202ENST00000448310 POLGP54098 1239 aaPredicted RBP31.65■■■□□ 2.66
CBX4-202ENST00000448310 NR5A1Q13285 461 aa31.65■■■□□ 2.66
CBX4-202ENST00000448310 NECAB1Q8N987 351 aa31.65■■■□□ 2.66
CBX4-202ENST00000448310 CDH22Q9UJ99 828 aa31.65■■■□□ 2.66
CBX4-202ENST00000448310 TBX3O15119 743 aa31.64■■■□□ 2.66
CBX4-202ENST00000448310 EPHA7Q15375 998 aa31.64■■■□□ 2.66
CBX4-202ENST00000448310 MRPL43Q8N983 215 aaKnown RBP31.64■■■□□ 2.66
CBX4-202ENST00000448310 PRPF31Q8WWY3 499 aaKnown RBP31.64■■■□□ 2.66
CBX4-202ENST00000448310 TMEM169Q96HH4 297 aa31.64■■■□□ 2.66
CBX4-202ENST00000448310 DYDC2Q96IM9 177 aa31.64■■■□□ 2.66
CBX4-202ENST00000448310 DHX33Q9H6R0 707 aaKnown RBP31.64■■■□□ 2.66
CBX4-202ENST00000448310 TBC1D13Q9NVG8 400 aa31.64■■■□□ 2.66
CBX4-202ENST00000448310 LARGE1O95461 756 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 SRGAP2CP0DJJ0 459 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 SKIP12755 728 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 FDPSP14324 419 aaKnown RBP31.63■■■□□ 2.65
CBX4-202ENST00000448310 CTTNQ14247 550 aaKnown RBP31.63■■■□□ 2.65
CBX4-202ENST00000448310 GLB1LQ6UWU2 654 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 NAP1L4Q99733 375 aaKnown RBP31.63■■■□□ 2.65
CBX4-202ENST00000448310 NRDE2Q9H7Z3 1164 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 MINDY3Q9H8M7 445 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 AGPAT5Q9NUQ2 364 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 HCFC2Q9Y5Z7 792 aa31.63■■■□□ 2.65
CBX4-202ENST00000448310 ZBTB39O15060 712 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 OFD1O75665 1012 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 SP100P23497 879 aaPredicted RBP31.62■■■□□ 2.65
CBX4-202ENST00000448310 YWHABP31946 246 aaKnown RBP31.62■■■□□ 2.65
CBX4-202ENST00000448310 CYP4A11Q02928 519 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 SPIRE1Q08AE8 756 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 NOMO2Q5JPE7 1267 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 C4orf19Q8IY42 314 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 PSPC1Q8WXF1 523 aaKnown RBP31.62■■■□□ 2.65
CBX4-202ENST00000448310 AUTS2Q8WXX7 1259 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 GBP3Q9H0R5 595 aa31.62■■■□□ 2.65
CBX4-202ENST00000448310 CLASP2O75122 1294 aaKnown RBP31.61■■■□□ 2.65
CBX4-202ENST00000448310 ZNF623O75123 536 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 KRT2P35908 639 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 RFC5P40937 340 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 RAB27AP51159 221 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 ANAPC15P60006 121 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 LAMTOR4Q0VGL1 99 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 ANKRD1Q15327 319 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 ME3Q16798 604 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 VPS52Q8N1B4 723 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 BCL7CQ8WUZ0 217 aaPredicted RBP31.61■■■□□ 2.65
CBX4-202ENST00000448310 WASF1Q92558 559 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 PCDHB2Q9Y5E7 798 aa31.61■■■□□ 2.65
CBX4-202ENST00000448310 CXCL14O95715 111 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 ZXDAP98168 799 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 RNASELQ05823 741 aaKnown RBP31.6■■■□□ 2.65
CBX4-202ENST00000448310 EMC2Q15006 297 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 XKR9Q5GH70 373 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 TRIM67Q6ZTA4 783 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 CASP10Q92851 521 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 TNFRSF25Q93038 417 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 MFSD14AQ96MC6 490 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 FBXL18Q96ME1 805 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 ZBP1Q9H171 429 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 DNAJB4Q9UDY4 337 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 PPME1Q9Y570 386 aa31.6■■■□□ 2.65
CBX4-202ENST00000448310 WDFY4Q6ZS81 3184 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 TMEM221A6NGB7 291 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 M0R296 226 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 B4GALT3O60512 393 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 GALTP07902 379 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 HOXB8P17481 243 aaPredicted RBP31.59■■■□□ 2.65
CBX4-202ENST00000448310 FOSBP53539 338 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 AGMOQ6ZNB7 445 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 SRGAP1Q7Z6B7 1085 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 SLFN12Q8IYM2 578 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 IGSF21Q96ID5 467 aa31.59■■■□□ 2.65
CBX4-202ENST00000448310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.58■■■□□ 2.65
CBX4-202ENST00000448310 BAG4O95429 457 aaKnown RBP31.58■■■□□ 2.65
CBX4-202ENST00000448310 OTUD6AQ7L8S5 288 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 ZNF280BQ86YH2 543 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 TPH2Q8IWU9 490 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 EXOC8Q8IYI6 725 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 RNF149Q8NC42 400 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 RSPH1Q8WYR4 309 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 GTF3C6Q969F1 213 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 PGBD4Q96DM1 585 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 ZSWIM4Q9H7M6 989 aa31.58■■■□□ 2.65
CBX4-202ENST00000448310 HOXA11P31270 313 aaPredicted RBP31.57■■■□□ 2.64
CBX4-202ENST00000448310 SLC11A1P49279 550 aa31.57■■■□□ 2.64
CBX4-202ENST00000448310 AFF1P51825 1210 aaKnown RBP31.57■■■□□ 2.64
CBX4-202ENST00000448310 UBXN11Q5T124 520 aa31.57■■■□□ 2.64
CBX4-202ENST00000448310 FERMT3Q86UX7 667 aa31.57■■■□□ 2.64
CBX4-202ENST00000448310 BRMS1Q9HCU9 246 aa31.57■■■□□ 2.64
CBX4-202ENST00000448310 PIEZO1Q92508 2521 aa31.57■■■□□ 2.64
CBX4-202ENST00000448310 BMS1Q14692 1282 aaKnown RBP31.56■■■□□ 2.64
CBX4-202ENST00000448310 TPRNQ4KMQ1 711 aa31.56■■■□□ 2.64
CBX4-202ENST00000448310 DDX53Q86TM3 631 aaKnown RBP31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms