RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 KSR1Q8IVT5 923 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 CAGE1Q8TC20 777 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 ASAP3Q8TDY4 903 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 DPF3Q92784 378 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 CCDC34Q96HJ3 373 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 DRC1Q96MC2 740 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 REEP2Q9BRK0 252 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 NTPCRQ9BSD7 190 aaKnown RBP8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 TRIM9Q9C026 710 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 BLZF1Q9H2G9 400 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 HIPK3Q9H422 1215 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 C17orf75Q9HAS0 396 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 ODF2LQ9ULJ1 636 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 WDR81Q562E7 1941 aa8.35□□□□□ -1.07
AC004540.1-206ENST00000448056 PVALEFA0A1B0GWK0 134 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 FRMD3A2A2Y4 597 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 SMAPO00193 183 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 TBCAO75347 108 aaKnown RBP8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 FAM13AO94988 1023 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 MBD3O95983 291 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 TIMP1P01033 207 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 IQCF3P0C7M6 154 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PLS3P13797 630 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 IDEP14735 1019 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 SELPP16109 830 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PTMSP20962 102 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 ITGB8P26012 769 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 NPTX2P47972 431 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 RGS19P49795 217 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 GPC3P51654 580 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 CRYBB1P53674 252 aaPredicted RBP8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PEX3P56589 373 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 MRPS6P82932 125 aaKnown RBP8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 MGAT3Q09327 533 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 DPYDQ12882 1025 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 TFDP1Q14186 410 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 POSTNQ15063 836 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 KIZQ2M2Z5 673 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 LAPTM4BQ86VI4 370 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 MYCT1Q8N699 235 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 RNF149Q8NC42 400 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 BSNDQ8WZ55 320 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 ZNF668Q96K58 619 aaPredicted RBP8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 IFT74Q96LB3 600 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PPP1R16BQ96T49 567 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 ZHX3Q9H4I2 956 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 IFT122Q9HBG6 1241 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PARVGQ9HBI0 331 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 PANK4Q9NVE7 773 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 LARSQ9P2J5 1176 aaKnown RBP8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 CDY2AQ9Y6F7 541 aa8.34□□□□□ -1.07
AC004540.1-206ENST00000448056 UMODL1Q5DID0 1318 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 A0A087WZ62 844 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CCDC169A6NNP5 214 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 M0QZ92 97 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 KLRC4O43908 158 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 RPN1P04843 607 aaKnown RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CTSHP09668 335 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 RAG1P15918 1043 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 GAP43P17677 238 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 EIF4BP23588 611 aaKnown RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CYP2C18P33260 490 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 NAMPTP43490 491 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 SMTNP53814 917 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CCL23P55773 120 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PTENP60484 403 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 ASIC1P78348 528 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 DMP1Q13316 513 aaPredicted RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PNOCQ13519 176 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CAPSQ13938 189 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 GPNMBQ14956 572 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PPP2R5AQ15172 486 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CAMK4Q16566 473 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 HERC4Q5GLZ8 1057 aaPredicted RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 ODR4Q5SWX8 454 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 UNC13DQ70J99 1090 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 LRRC8DQ7L1W4 858 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 ZNF410Q86VK4 478 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CCDC65Q8IXS2 484 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 NLRP7Q8WX94 980 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 NLRP4Q96MN2 994 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 FDXACB1Q9BRP7 624 aaPredicted RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 GCOM2Q9BZD3 368 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms