RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
LINC00408-201ENST00000447784 GIT2Q14161 759 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 IKBKEQ14164 716 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 KIZQ2M2Z5 673 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 PLEKHG4Q58EX7 1191 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 ODR4Q5SWX8 454 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 ZBTB8OSQ8IWT0 167 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 LINC01465Q8N7H1 131 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 RNF149Q8NC42 400 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 PPP1R16BQ96T49 567 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
LINC00408-201ENST00000447784 C7orf25Q9BPX7 421 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
LINC00408-201ENST00000447784 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
LINC00408-201ENST00000447784 LAMA2P24043 3122 aaKnown RBP12.8□□□□□ -0.36
LINC00408-201ENST00000447784 SFI1A8K8P3 1242 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 H0YCG3 227 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 GLRA2P23416 452 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 NAMPTP43490 491 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 KCNJ6P48051 423 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 GPC3P51654 580 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 PEX3P56589 373 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 WDR5P61964 334 aaKnown RBP12.79□□□□□ -0.36
LINC00408-201ENST00000447784 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
LINC00408-201ENST00000447784 POSTNQ15063 836 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 HERC4Q5GLZ8 1057 aaPredicted RBP12.79□□□□□ -0.36
LINC00408-201ENST00000447784 KSR1Q8IVT5 923 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 HERC6Q8IVU3 1022 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 SLC28A3Q9HAS3 691 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 KMT5AQ9NQR1 393 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 CDY2AQ9Y6F7 541 aa12.79□□□□□ -0.36
LINC00408-201ENST00000447784 A0A087WZ62 844 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 CHRNA1P02708 482 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 EFNA5P52803 228 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 MGAT3Q09327 533 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 CUL4BQ13620 913 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 CNNM4Q6P4Q7 775 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 FAM178BQ8IXR5 827 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
LINC00408-201ENST00000447784 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 SEPT8Q92599 483 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 APBB2Q92870 758 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
LINC00408-201ENST00000447784 OSMRQ99650 979 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 FDXACB1Q9BRP7 624 aaPredicted RBP12.78□□□□□ -0.36
LINC00408-201ENST00000447784 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 RMND1Q9NWS8 449 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 YBX2Q9Y2T7 364 aaKnown RBP12.78□□□□□ -0.36
LINC00408-201ENST00000447784 SQORQ9Y6N5 450 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
LINC00408-201ENST00000447784 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 GPR182O15218 404 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 TRAK2O60296 914 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 GPR32O75388 356 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 DARSP14868 501 aaKnown RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SCP2P22307 547 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 EIF4BP23588 611 aaKnown RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 ABCD1P33897 745 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 NPTX2P47972 431 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 ZNF131P52739 623 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 RABGGTBP53611 331 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 STRN3Q13033 797 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 MAPK7Q13164 816 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 CAPSQ13938 189 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SKOR2Q2VWA4 1001 aaPredicted RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 FAM43BQ6ZT52 329 aaPredicted RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 UNC13DQ70J99 1090 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 DAW1Q8N136 415 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SPIRE2Q8WWL2 714 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SMARCE1Q969G3 411 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
LINC00408-201ENST00000447784 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.37
LINC00408-201ENST00000447784 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
LINC00408-201ENST00000447784 K7ENM7 598 aa12.76□□□□□ -0.37
LINC00408-201ENST00000447784 K7ERI5 159 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms