RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 FOXR2Q6PJQ5 311 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 SRRM1Q8IYB3 904 aaKnown RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 GORASP1Q9BQQ3 440 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 NKIRAS1Q9NYS0 192 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 GCNT4Q9P109 453 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 SEC63Q9UGP8 760 aaKnown RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 E9PMD0 336 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
CNOT3-204ENST00000447684 CUL3Q13618 768 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 RCN2Q14257 317 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 MTHFD1LQ6UB35 978 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 FGD4Q96M96 766 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 CARD9Q9H257 536 aa17.24■□□□□ 0.35
CNOT3-204ENST00000447684 KIAA1551Q9HCM1 1747 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 RARGP13631 454 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 HOXA7P31268 230 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 TTC27Q6P3X3 843 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ARHGAP22Q7Z5H3 698 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 RFFLQ8WZ73 363 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ARHGEF26Q96DR7 871 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 CDC42EP4Q9H3Q1 356 aaKnown RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PRKAG3Q9UGI9 489 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 CHORDC1Q9UHD1 332 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 SCOCQ9UIL1 159 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PHF2O75151 1096 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 CBX6O95503 412 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 TNNI2P48788 182 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 MARCKSL1P49006 195 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 CALCOCO2Q13137 446 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ZC3H18Q86VM9 953 aaKnown RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 LNX1Q8TBB1 728 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 TTC7AQ9ULT0 858 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 GPR75-ASB3A0A0A6YYF3 556 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 A0A0A6YYK5 440 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ATF3P18847 181 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PTGIRP43119 386 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 USP4Q13107 963 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 USP17L2Q6R6M4 530 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 APBB1IPQ7Z5R6 666 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 GPBP1Q86WP2 473 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 PHC3Q8NDX5 983 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 KIFAP3Q92845 792 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 POP1Q99575 1024 aaKnown RBP17.23■□□□□ 0.35
CNOT3-204ENST00000447684 TBC1D10AQ9BXI6 508 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
CNOT3-204ENST00000447684 NVLO15381 856 aaKnown RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 STAT1P42224 750 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 MECOMQ03112 1051 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 LBRQ14739 615 aaKnown RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 AGGF1Q8N302 714 aaeCLIP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 KRT35Q92764 455 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 RUNDC3BQ96NL0 473 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 MTMR9Q96QG7 549 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 METTL5Q9NRN9 209 aaKnown RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 KIAA1024Q9UPX6 916 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 CHRNA3P32297 505 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 SKIV2L2P42285 1042 aaKnown RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 DNAJC3Q13217 504 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 LRRC23Q53EV4 343 aaPredicted RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 ZC3H12AQ5D1E8 599 aaKnown RBP17.22■□□□□ 0.35
CNOT3-204ENST00000447684 RNF43Q68DV7 783 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 PIGSQ96S52 555 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 THAP2Q9H0W7 228 aa17.22■□□□□ 0.35
CNOT3-204ENST00000447684 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 PRKCIP41743 596 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 MTFR1Q15390 333 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.21■□□□□ 0.357e-6■■■■□ 20.7
CNOT3-204ENST00000447684 LRRC8CQ8TDW0 803 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 TMEM109Q9BVC6 243 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 LRMDAQ9H2I8 198 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 KCTD10Q9H3F6 313 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 DENND2DQ9H6A0 471 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-204ENST00000447684 ATP8A2Q9NTI2 1148 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 NMRK1Q9NWW6 199 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
CNOT3-204ENST00000447684 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms