RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 SYDE1Q6ZW31 735 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 HEATR4Q86WZ0 1026 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ERI1Q8IV48 349 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 GRK7Q8WTQ7 553 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CDHR1Q96JP9 859 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NSMCE3Q96MG7 304 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HERC2P3Q9BVR0 1158 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TRIM15Q9C019 465 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TAS2R1Q9NYW7 299 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RASA4BC9J798 803 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RASA4O43374 803 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SNX3O60493 162 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RECQLP46063 649 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 GUCY2DQ02846 1103 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FOXR2Q6PJQ5 311 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 LONP2Q86WA8 852 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ENKURQ8TC29 256 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ASAP3Q8TDY4 903 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PRPF31Q8WWY3 499 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 LTV1Q96GA3 475 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 NDST4Q9H3R1 872 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ECT2Q9H8V3 914 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PFDN4Q9NQP4 134 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NLRP2Q9NX02 1062 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MINK1Q8N4C8 1332 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ATP10BO94823 1461 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 HAT1O14929 419 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FECHP22830 423 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GRIK1P39086 918 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MTIF2P46199 727 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 RCAN1P53805 252 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NLRP6P59044 892 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CYP4F8P98187 520 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 LPIN1Q14693 890 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ARL13BQ3SXY8 428 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ALFQ53S48 1182 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PRR16Q569H4 304 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GALNT6Q8NCL4 622 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SERPINB12Q96P63 405 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PRAM1Q96QH2 718 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 TSEN34Q9BSV6 310 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ZMYND12Q9H0C1 365 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 AGAP1Q9UPQ3 857 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 STON1Q9Y6Q2 735 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 LMTK2Q8IWU2 1503 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 GPATCH8Q9UKJ3 1502 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ARHGEF5Q12774 1597 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ATMINO43313 823 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 THAP12O43422 761 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ETV3P41162 512 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CEP55Q53EZ4 464 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SLX4IPQ5VYV7 408 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CCSAPQ6IQ19 270 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ERAP2Q6P179 960 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FAM122CQ6P4D5 195 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RASSF3Q86WH2 238 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FMR1NBQ8N0W7 255 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 KIFC2Q96AC6 838 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 L3MBTL3Q96JM7 780 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 CNBD2Q96M20 576 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 FAM161BQ96MY7 647 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CLK4Q9HAZ1 481 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 CYP4F11Q9HBI6 524 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CYP4F12Q9HCS2 524 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PCMTD2Q9NV79 361 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RRN3Q9NYV6 651 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CHD1O14646 1710 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 MYH2Q9UKX2 1941 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 AP3B1O00203 1094 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 IGF2BP3O00425 579 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ACTN1P12814 892 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ACAT1P24752 427 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 EIF2B2P49770 351 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 TTF1Q15361 905 aaPredicted RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 ANKDD1AQ495B1 522 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CAVIN4Q5BKX8 364 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ZNF598Q86UK7 904 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 RNF169Q8NCN4 708 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 ANGPTL6Q8NI99 470 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 AGAP11Q8TF27 550 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 RNPC3Q96LT9 517 aaKnown RBP3.11□□□□□ -1.91
CHD9-203ENST00000447540 MAP3K14Q99558 947 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PSTPIP2Q9H939 334 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 VTA1Q9NP79 307 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 CYLDQ9NQC7 956 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SLC39A1Q9NY26 324 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 PNMA2Q9UL42 364 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 SYNGAP1Q96PV0 1343 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 NUMA1Q14980 2115 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 IQSEC2Q5JU85 1478 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 H0Y3Z8 333 aa3.1□□□□□ -1.91
CHD9-203ENST00000447540 ANGPT2O15123 496 aa3.1□□□□□ -1.91
CHD9-203ENST00000447540 PFDN6O15212 129 aa3.1□□□□□ -1.91
CHD9-203ENST00000447540 CA8P35219 290 aa3.1□□□□□ -1.91
CHD9-203ENST00000447540 YARSP54577 528 aaKnown RBP3.1□□□□□ -1.91
CHD9-203ENST00000447540 HPCAP84074 193 aa3.1□□□□□ -1.91
CHD9-203ENST00000447540 TMC5Q6UXY8 1006 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms