RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ASB16Q96NS5 453 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 SPATC1LQ9H0A9 340 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 CBX8Q9HC52 389 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 HYPKQ9NX55 129 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 SMG5Q9UPR3 1016 aaKnown RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 INSL6Q9Y581 213 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-205ENST00000447267 NBEAQ8NFP9 2946 aa6.21□□□□□ -1.42
SDCBP-205ENST00000447267 ABCA12Q86UK0 2595 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 C2CD4DB7Z1M9 353 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 E9PSI1 815 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 ATF7P17544 494 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-205ENST00000447267 FUT4P22083 530 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 PRDX5P30044 214 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 GSTT1P30711 240 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 NRIP1P48552 1158 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 UBE4AQ14139 1066 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 IL31Q6EBC2 164 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 C12orf40Q86WS4 652 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 C1orf210Q8IVY1 113 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 MAML2Q8IZL2 1156 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-205ENST00000447267 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-205ENST00000447267 AGBL5Q8NDL9 886 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 FBF1Q8TES7 1133 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 CNNM1Q9NRU3 951 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 DLG5Q8TDM6 1919 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 ASTN1O14525 1302 aa6.2□□□□□ -1.42
SDCBP-205ENST00000447267 ROBO3Q96MS0 1386 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 KCNK5O95279 499 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 CEACAM5P06731 702 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 CDK8P49336 464 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 HTRA4P83105 476 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 ACVR2BQ13705 512 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 CAMK1Q14012 370 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 ZBTB37Q5TC79 503 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 LDHAL6AQ6ZMR3 332 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 NOL8Q76FK4 1167 aaKnown RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 ABRAQ8N0Z2 381 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 EFHBQ8N7U6 833 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 HNRNPLLQ8WVV9 542 aaKnown RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 LRIG1Q96JA1 1093 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 SAMD11Q96NU1 681 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 MMP19Q99542 508 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 PUS3Q9BZE2 481 aaKnown RBP6.19□□□□□ -1.42
SDCBP-205ENST00000447267 TNKS2Q9H2K2 1166 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 FBXL21Q9UKT6 434 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 PPM1HQ9ULR3 514 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 WASF3Q9UPY6 502 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 SUGT1Q9Y2Z0 365 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 DOCK1Q14185 1865 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 DOPEY1Q5JWR5 2465 aa6.19□□□□□ -1.42
SDCBP-205ENST00000447267 SCN5AQ14524 2016 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 J3QKU1 62 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 PER2O15055 1255 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 CABYRO75952 493 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 USP17L7P0C7H9 530 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 SUPT20HL2P0C7V6 817 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 VCAM1P19320 739 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 DNAJB1P25685 340 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 CTNNB1P35222 781 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 ZEB1P37275 1124 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 IFIT5Q13325 482 aaKnown RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 GCKRQ14397 625 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 INPP5AQ14642 412 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 LLGL2Q6P1M3 1020 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 CNKSR3Q6P9H4 555 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 LRFN4Q6PJG9 635 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 MYOCDQ8IZQ8 938 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 VN1R2Q8NFZ6 395 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 ATRIPQ8WXE1 791 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 DDX1Q92499 740 aaKnown RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 SCNM1Q9BWG6 230 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 SIL1Q9H173 461 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 S1PR5Q9H228 398 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 MROH8Q9H579 483 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 RPAP3Q9H6T3 665 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 GMEB2Q9UKD1 530 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 MAP3K2Q9Y2U5 619 aa6.18□□□□□ -1.42
SDCBP-205ENST00000447267 DSPP15924 2871 aaKnown RBP6.18□□□□□ -1.42
SDCBP-205ENST00000447267 MYH3P11055 1940 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 LOC400499M0QZD8 3231 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 ABHD14A-ACY1A0A1B0GW23 586 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 GIPC1O14908 333 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 NBNO60934 754 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 LRRN2O75325 713 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 ASNSP08243 561 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 ITIH2P19823 946 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 PRKCQQ04759 706 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 CSTF1Q05048 431 aaKnown RBP6.17□□□□□ -1.42
SDCBP-205ENST00000447267 FSCN1Q16658 493 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms