RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CERKLQ49MI3 558 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 OTOP1Q7RTM1 612 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 DAGLBQ8NCG7 672 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 DACT3Q96B18 629 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 EDC3Q96F86 508 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 CCDC17Q96LX7 622 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 R3HDMLQ9H3Y0 253 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 DNAJC18Q9H819 358 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 SIPA1L1O43166 1804 aa9.25□□□□□ -0.93
SMARCE1-206ENST00000447024 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 RGS13O14921 159 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 MBD4O95243 580 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 USP14P54578 494 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 PDE1AP54750 535 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 LACTBP83111 547 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 MPP2Q14168 576 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 GADL1Q6ZQY3 521 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 REC114Q7Z4M0 266 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 EVI5LQ96CN4 794 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 C12orf42Q96LP6 360 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 CNTD2Q9H8S5 307 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 ZNF287Q9HBT7 754 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 EPB41L4AQ9HCS5 686 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 TMOD4Q9NZQ9 345 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 ARPP21Q9UBL0 812 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 TRIM17Q9Y577 477 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 DDX60LQ5H9U9 1706 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 ADGRA2Q96PE1 1338 aa9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 KIAA0100Q14667 2235 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-206ENST00000447024 LOC285556D6RIA3 1793 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 N4BP3O15049 544 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 UBOX5O94941 541 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 SDHBP21912 280 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 GBP2P32456 591 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 RGS19P49795 217 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 PLCD1P51178 756 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 PCBP3P57721 371 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 RNF4P78317 190 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 NUCB1Q02818 461 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 RRP1BQ14684 758 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 FAM110CQ1W6H9 321 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 C12orf60Q5U649 245 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 TMEM179Q6ZVK1 233 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 TMC3Q7Z5M5 1100 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 CXorf38Q8TB03 319 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 SMCR8Q8TEV9 937 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 FAM161BQ96MY7 647 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 NACAP1Q9BZK3 213 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 KIAA1683Q9H0B3 1180 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 BCL11AQ9H165 835 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 ARMT1Q9H993 441 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 PTPN22Q9Y2R2 807 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 SLC4A4Q9Y6R1 1079 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 NAV1Q8NEY1 1877 aa9.23□□□□□ -0.93
SMARCE1-206ENST00000447024 OTOL1A6NHN0 477 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SLC22A31A6NKX4 558 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 GH2P01242 217 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 CAPN2P17655 700 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SHMT1P34896 483 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 HMGCS2P54868 508 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SNAP47Q5SQN1 464 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 ZPBP2Q6X784 338 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 C16orf86Q6ZW13 317 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 RELL1Q8IUW5 271 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 ZNF655Q8N720 491 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 FBXO27Q8NI29 283 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SDR42E1Q8WUS8 393 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 OSBP2Q969R2 916 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 CRELD1Q96HD1 420 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 PLCD4Q9BRC7 762 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 FSD1Q9BTV5 496 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SH2D4AQ9H788 454 aa9.22□□□□□ -0.93
SMARCE1-206ENST00000447024 SSU72P8A0A1W2PR75 194 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 CCDC85CA6NKD9 419 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 GSG1L2A8MUP6 293 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 GPAA1O43292 621 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 PNLIPP16233 465 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 NT5C2P49902 561 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 YBX1P67809 324 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 IRX3P78415 501 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
SMARCE1-206ENST00000447024 ARMC5Q96C12 935 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms