RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 OTOL1A6NHN0 477 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 MT-CO1P00395 513 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 FAM124AQ86V42 546 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 UNC5BQ8IZJ1 945 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 LGI4Q8N135 537 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 PIK3C3Q8NEB9 887 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 CFHR4Q92496 578 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 PMM1Q92871 262 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 GFM2Q969S9 779 aaKnown RBP5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 QRSL1Q9H0R6 528 aaKnown RBP5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 PARD6AQ9NPB6 346 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 DPP7Q9UHL4 492 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 SCOCQ9UIL1 159 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 ZDHHC9Q9Y397 364 aa5.85□□□□□ -1.47
HMGB1P48-201ENST00000446155 MATN2O00339 956 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 ARHGAP6O43182 974 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 NRP2O60462 931 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 TMEM127O75204 238 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 SASH1O94885 1247 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 CFBP00751 764 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 MYBL2P10244 700 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 GAAP10253 952 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 MTHFD2P13995 350 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 EPHB4P54760 987 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 RRADP55042 308 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 ADAM8P78325 824 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 SPIDRQ14159 915 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 PCBP2Q15366 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 ZFYVE27Q5T4F4 411 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 BORAQ6PGQ7 559 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 FRMD5Q7Z6J6 570 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 RAVER1Q8IY67 606 aaKnown RBP5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 RTKN2Q8IZC4 609 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 AUTS2Q8WXX7 1259 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 SSH1Q8WYL5 1049 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 SMAD5Q99717 465 aaKnown RBP5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 DNAJC28Q9NX36 388 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 SYNPO2Q9UMS6 1093 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 GPR45Q9Y5Y3 372 aa5.84□□□□□ -1.47
HMGB1P48-201ENST00000446155 ALDH1L1O75891 902 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 LY86O95711 162 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 MEOX1P50221 254 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 NEK2P51955 445 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 CD69Q07108 199 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 MCL1Q07820 350 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 ADAM15Q13444 863 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 TTF1Q15361 905 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 MAN2A1Q16706 1144 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 ANO4Q32M45 955 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 USP30Q70CQ3 517 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 GLB1L2Q8IW92 636 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 LPPQ93052 612 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 RELTQ969Z4 430 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 CHMP4CQ96CF2 233 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 MEGF9Q9H1U4 602 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 SEC61A2Q9H9S3 476 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 IFT122Q9HBG6 1241 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 INVSQ9Y283 1065 aa5.83□□□□□ -1.48
HMGB1P48-201ENST00000446155 PMS2P1A4D2B8 440 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 FSBPO95073 299 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 OSMP13725 252 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 ADCY7P51828 1080 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 ADRM1Q16186 407 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 PTPN21Q16825 1174 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 MBNL2Q5VZF2 373 aaKnown RBP5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 PGM2L1Q6PCE3 622 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 PLEKHH3Q7Z736 793 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 JADE3Q92613 823 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 TSR2Q969E8 191 aaKnown RBP5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 SLC7A6OSQ96CW6 309 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 PCGF6Q9BYE7 350 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 JADE2Q9NQC1 790 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 USP40Q9NVE5 1235 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 MKS1Q9NXB0 559 aa5.82□□□□□ -1.48
HMGB1P48-201ENST00000446155 MTSS1O43312 755 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 B4GALT4O60513 344 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 EIF3JO75822 258 aaKnown RBP5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 CNR2P34972 360 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 EPHB1P54762 984 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 NRG3P56975 720 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 RHBDL3P58872 404 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 PPP2CBP62714 309 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 PPP2CAP67775 309 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 MEF2AQ02078 507 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 MGAT5Q09328 741 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 DUSP8Q13202 625 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 ODF1Q14990 250 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 NFE2Q16621 373 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 TMEM240Q5SV17 173 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 WDR75Q8IWA0 830 aaKnown RBP5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 AMOTL1Q8IY63 956 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 PLA2G15Q8NCC3 412 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 TEPSINQ96N21 525 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 ZCCHC4Q9H5U6 513 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 TCF7L1Q9HCS4 588 aa5.81□□□□□ -1.48
HMGB1P48-201ENST00000446155 TUBD1Q9UJT1 453 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms