RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 PANX2Q96RD6 677 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 PPP1R16BQ96T49 567 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 EPAS1Q99814 870 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 FGFR1OP2Q9NVK5 253 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 IL18RAPO95256 599 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 VAMP7P51809 220 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 CTTNQ14247 550 aaKnown RBP12.49□□□□□ -0.41
FN1-212ENST00000446046 ANO4Q32M45 955 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 RBAKQ9NYW8 714 aaPredicted RBP12.49□□□□□ -0.41
FN1-212ENST00000446046 EXOC1LA0A1B0GW35 172 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 NR1H3Q13133 447 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 HAUS6Q7Z4H7 955 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
FN1-212ENST00000446046 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 TMEM47Q9BQJ4 181 aa12.49□□□□□ -0.41
FN1-212ENST00000446046 DNAJC6O75061 913 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 KRT37O76014 449 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 OCRLQ01968 901 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 YWHAHQ04917 246 aaPredicted RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 NDST4Q9H3R1 872 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 PCDHA5Q9Y5H7 936 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 FOXP2O15409 715 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 EPHB4P54760 987 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 SLC12A1Q13621 1099 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 BANK1Q8NDB2 785 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 MTBPQ96DY7 904 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 MED15Q96RN5 788 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 PRKAB2O43741 272 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 SDC4P31431 198 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 TCP11X2Q5H9J9 407 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 MYRIPQ8NFW9 859 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 H3BRJ5 948 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 TXNP10599 105 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 CYP2C19P33261 490 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 MTMR2Q13614 643 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 KNOP1Q1ED39 458 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 LXNQ9BS40 222 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 EIF2AQ9BY44 585 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 CPSF2Q9P2I0 782 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 LMTK2Q8IWU2 1503 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 TFRCP02786 760 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 GNA15P30679 374 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 HSP90AA5PQ58FG0 334 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ANKS3Q6ZW76 656 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 DPH5Q9H2P9 285 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 AMPD2Q01433 879 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ELF2Q15723 593 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ZWILCHQ9H900 591 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ORC4O43929 436 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 LUC7L3O95232 432 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 ESRRBO95718 433 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 NR3C1P04150 777 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 PCSK1P29120 753 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 SNRPFP62306 86 aaKnown RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 KIF23Q02241 960 aaPredicted RBP12.48□□□□□ -0.41
FN1-212ENST00000446046 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 ULK4Q96C45 1275 aa12.48□□□□□ -0.41
FN1-212ENST00000446046 CCDC188H7C350 402 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 KPNA6O60684 536 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 ADCY2Q08462 1091 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 LAMC2Q13753 1193 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 THNSL1Q8IYQ7 743 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 ENTPD3O75355 529 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 MAP4P27816 1152 aaKnown RBP12.47□□□□□ -0.41
FN1-212ENST00000446046 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
FN1-212ENST00000446046 CFAP36Q96G28 342 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 PARVAQ9NVD7 372 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 GPC5P78333 572 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 NR5A1Q13285 461 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
FN1-212ENST00000446046 CHST13Q8NET6 341 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
FN1-212ENST00000446046 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 NHEJ1Q9H9Q4 299 aaPredicted RBP12.47□□□□□ -0.41
FN1-212ENST00000446046 KPNA7A9QM74 516 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 CYP27B1O15528 508 aa12.47□□□□□ -0.41
FN1-212ENST00000446046 HOXA2O43364 376 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms