RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 HECW2Q9P2P5 1572 aa3.12□□□□□ -1.91
RPL39P40-201ENST00000445481 NUP155O75694 1391 aa3.12□□□□□ -1.91
RPL39P40-201ENST00000445481 CEMIPQ8WUJ3 1361 aa3.12□□□□□ -1.91
RPL39P40-201ENST00000445481 ZNF518AQ6AHZ1 1483 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 A0A0G2JLL6 359 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 A0A1B0GVL5 298 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 TMEM247A6NEH6 219 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CCT8L1PA6NM43 557 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 GNAT3A8MTJ3 354 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 DNM1LO00429 736 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 LSM1O15116 133 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 TRAPPC3O43617 180 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 NUAK1O60285 661 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 DIAPH2O60879 1101 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HIP1RO75146 1068 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MTRF1O75570 445 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 TRIM37O94972 964 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SLITRK5O94991 958 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RAPGEF3O95398 923 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SERPINC1P01008 464 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 LMNAP02545 664 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SSBP05455 408 aaKnown RBP eCLIP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MMEP08473 750 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CLTAP09496 248 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MED14OSP0DP75 135 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 POLR2EP19388 210 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 NR1D1P20393 614 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 IBSPP21815 317 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 S100A1P23297 94 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SP100P23497 879 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PSMA5P28066 241 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HOXD12P35452 270 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PCK1P35558 622 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 TCF7P36402 384 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MLH1P40692 756 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 STAT6P42226 847 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SKIV2L2P42285 1042 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CLCN7P51798 805 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HNRNPMP52272 730 aaKnown RBP eCLIP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PDE1AP54750 535 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 AK2P54819 239 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 POLE2P56282 527 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 LINC00310P59036 64 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ARHGAP4P98171 946 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HDLBPQ00341 1268 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 AMPD2Q01433 879 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MYL5Q02045 173 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ZNF252P-AS1Q0IIN9 211 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MAP3K12Q12852 859 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 FOXD4Q12950 439 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ZBTB17Q13105 803 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 EIF2B5Q13144 721 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PDCLQ13371 301 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ADAM9Q13443 819 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 BIRC3Q13489 604 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RCN1Q15293 331 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 GSTA3Q16772 222 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ME3Q16798 604 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CFAP100Q494V2 611 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SLC44A4Q53GD3 710 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PARP10Q53GL7 1025 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RALGPS1Q5JS13 557 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RASIP1Q5U651 963 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SPECC1LQ69YQ0 1117 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 NCAPH2Q6IBW4 605 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 GALNT17Q6IS24 598 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HIBCHQ6NVY1 386 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 LRIG3Q6UXM1 1119 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PACS1Q6VY07 963 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 DTHD1Q6ZMT9 781 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ZNF662Q6ZS27 426 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 Q6ZUG5 572 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RUFY3Q7L099 469 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RASGRP2Q7LDG7 609 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ZNF572Q7Z3I7 529 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 FAM186BQ8IYM0 893 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MREGQ8N565 214 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PDILTQ8N807 584 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ARL10Q8N8L6 244 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SYT2Q8N9I0 419 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 EIF1ADQ8N9N8 165 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CNBD1Q8NA66 436 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 MIGA1Q8NAN2 632 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RETREG2Q8NC44 543 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ATRIPQ8WXE1 791 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 CCT6BQ92526 530 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 PTPRN2Q92932 1015 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 ATP6V0A1Q93050 837 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 AZIN2Q96A70 460 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 NACC2Q96BF6 587 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RRP36Q96EU6 259 aaKnown RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SEC16BQ96JE7 1060 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 SNX27Q96L92 541 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 OLFM3Q96PB7 478 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 GBP5Q96PP8 586 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 RAB3IPQ96QF0 476 aaPredicted RBP3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 UIMC1Q96RL1 719 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 HAPLN3Q96S86 360 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 FAM129BQ96TA1 746 aa3.11□□□□□ -1.91
RPL39P40-201ENST00000445481 TIPINQ9BVW5 301 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms