RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 P4HBP07237 508 aaKnown RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 SRGAP2CP0DJJ0 459 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 HOXB8P17481 243 aaPredicted RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 XBP1P17861 261 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 NHLH1Q02575 133 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 TMEM173Q86WV6 379 aaPredicted RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 PRPF31Q8WWY3 499 aaKnown RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 AUTS2Q8WXX7 1259 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 CASP10Q92851 521 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 TMEM143Q96AN5 459 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 KCNH6Q9H252 994 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 RGL1Q9NZL6 768 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 COL4A3BPQ9Y5P4 624 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 HCFC2Q9Y5Z7 792 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 ZBTB39O15060 712 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 PFKFB2O60825 505 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
SEC13-213ENST00000445064 ZNF623O75123 536 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 CTDNEP1O95476 244 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
SEC13-213ENST00000445064 POLGP54098 1239 aaPredicted RBP17.28■□□□□ 0.36
SEC13-213ENST00000445064 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
SEC13-213ENST00000445064 EPHA7Q15375 998 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 SLC7A3Q8WY07 619 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 DYDC2Q96IM9 177 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 GBP3Q9H0R5 595 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 DNAJB4Q9UDY4 337 aa17.28■□□□□ 0.36
SEC13-213ENST00000445064 STK36Q9NRP7 1315 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 FAM205CA6NFA0 338 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 TBX3O15119 743 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 GALTP07902 379 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
SEC13-213ENST00000445064 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
SEC13-213ENST00000445064 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 IER5LQ5T953 404 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 NCAPH2Q6IBW4 605 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 KANK3Q6NY19 840 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 ZNF280BQ86YH2 543 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 C4orf19Q8IY42 314 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 BCL7CQ8WUZ0 217 aaPredicted RBP17.27■□□□□ 0.36
SEC13-213ENST00000445064 PGBD4Q96DM1 585 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 IGSF21Q96ID5 467 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 ADAM7Q9H2U9 754 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.36
SEC13-213ENST00000445064 MINDY3Q9H8M7 445 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.36
SEC13-213ENST00000445064 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
SEC13-213ENST00000445064 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 YWHABP31946 246 aaKnown RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 SLC11A1P49279 550 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 RAB27AP51159 221 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 AFF1P51825 1210 aaKnown RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 AK2P54819 239 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 LAMTOR4Q0VGL1 99 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 NR5A1Q13285 461 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 CES5AQ6NT32 575 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 AGMOQ6ZNB7 445 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 OTUD6AQ7L8S5 288 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 SRGAP1Q7Z6B7 1085 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 EXOC8Q8IYI6 725 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 C12orf76Q8N812 135 aaPredicted RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
SEC13-213ENST00000445064 LXNQ9BS40 222 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 POMKQ9H5K3 350 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 TECTAO75443 2155 aa17.26■□□□□ 0.35
SEC13-213ENST00000445064 B4GALT3O60512 393 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 DDHD2O94830 711 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
SEC13-213ENST00000445064 CTSAP10619 480 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
SEC13-213ENST00000445064 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
SEC13-213ENST00000445064 RFC5P40937 340 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 MRE11P49959 708 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 ITIH3Q06033 890 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 RARS2Q5T160 578 aaKnown RBP17.25■□□□□ 0.35
SEC13-213ENST00000445064 MRPL10Q7Z7H8 261 aaKnown RBP17.25■□□□□ 0.35
SEC13-213ENST00000445064 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 RSPH1Q8WYR4 309 aa17.25■□□□□ 0.35
SEC13-213ENST00000445064 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms