RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ERLIN2O94905 339 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 CDC25AP30304 524 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 MAEAQ7L5Y9 396 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 RNF169Q8NCN4 708 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 GPRC5CQ9NQ84 441 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 FAM105AQ9NUU6 356 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 TYW1Q9NV66 732 aaKnown RBP20.66■□□□□ 0.9
CCDC188-202ENST00000444532 PCDHB12Q9Y5F1 795 aa20.66■□□□□ 0.9
CCDC188-202ENST00000444532 INO80B-WBP1J3KQ70 363 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 EYA4O95677 639 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 ATF7P17544 494 aaPredicted RBP20.65■□□□□ 0.9
CCDC188-202ENST00000444532 HOXA11P31270 313 aaPredicted RBP20.65■□□□□ 0.9
CCDC188-202ENST00000444532 SKIV2LQ15477 1246 aaKnown RBP20.65■□□□□ 0.9
CCDC188-202ENST00000444532 HYIQ5T013 277 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 SPOUT1Q5T280 376 aaKnown RBP20.65■□□□□ 0.9
CCDC188-202ENST00000444532 ATXN2LQ8WWM7 1075 aaKnown RBP20.65■□□□□ 0.9
CCDC188-202ENST00000444532 AK8Q96MA6 479 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 NT5C3AQ9H0P0 336 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 PRDM6Q9NQX0 595 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 FOXD4L1Q9NU39 408 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 THEGQ9P2T0 379 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 REV3LO60673 3130 aa20.65■□□□□ 0.9
CCDC188-202ENST00000444532 SLC26A4O43511 780 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 MBTD1Q05BQ5 628 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 SF3A1Q15459 793 aaKnown RBP20.64■□□□□ 0.89
CCDC188-202ENST00000444532 CSPP1Q1MSJ5 1256 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 TIGD5Q53EQ6 642 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 CLLU1OSQ5K130 101 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 CWH43Q9H720 699 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
CCDC188-202ENST00000444532 LRRIQ4A6NIV6 560 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 E9PMD0 336 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 GRM6O15303 877 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 STX6O43752 255 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 TSPAN1O60635 241 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 LAG3P18627 525 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 RESTQ13127 1097 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 PPP2R5AQ15172 486 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 NOTUMQ6P988 496 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 MRPL10Q7Z7H8 261 aaKnown RBP20.63■□□□□ 0.89
CCDC188-202ENST00000444532 LRRC43Q8N309 656 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 KLHL23Q8NBE8 558 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 CNNM3Q8NE01 707 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 HELQQ8TDG4 1101 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 KIFAP3Q92845 792 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 CCDC51Q96ER9 411 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 MRPL9Q9BYD2 267 aaKnown RBP20.63■□□□□ 0.89
CCDC188-202ENST00000444532 ZSCAN16Q9H4T2 348 aaPredicted RBP20.63■□□□□ 0.89
CCDC188-202ENST00000444532 COG5Q9UP83 839 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
CCDC188-202ENST00000444532 ITGB1P05556 798 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
CCDC188-202ENST00000444532 NAMPTP43490 491 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 AMHR2Q16671 573 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 UBXN11Q5T124 520 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 CDCA2Q69YH5 1023 aaPredicted RBP20.62■□□□□ 0.89
CCDC188-202ENST00000444532 LRRC55Q6ZSA7 311 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 ZBTB8OSQ8IWT0 167 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 COLGALT1Q8NBJ5 622 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 SPPL3Q8TCT6 385 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 IFT74Q96LB3 600 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 NSUN3Q9H649 340 aaKnown RBP20.62■□□□□ 0.89
CCDC188-202ENST00000444532 ALG13Q9NP73 1137 aaKnown RBP20.62■□□□□ 0.89
CCDC188-202ENST00000444532 UNC80Q8N2C7 3258 aa20.62■□□□□ 0.89
CCDC188-202ENST00000444532 LONP1P36776 959 aaKnown RBP20.61■□□□□ 0.89
CCDC188-202ENST00000444532 MRPS5P82675 430 aaKnown RBP20.61■□□□□ 0.89
CCDC188-202ENST00000444532 ZRSR1Q15695 479 aaKnown RBP20.61■□□□□ 0.89
CCDC188-202ENST00000444532 FAM187BQ17R55 369 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 GLB1LQ6UWU2 654 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 LPPQ93052 612 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 HLA-CQ95604 372 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 CDK5RAP3Q96JB5 506 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 PRIMPOLQ96LW4 560 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 PNMA5Q96PV4 448 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
CCDC188-202ENST00000444532 PRMT7Q9NVM4 692 aaPredicted RBP20.61■□□□□ 0.89
CCDC188-202ENST00000444532 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
CCDC188-202ENST00000444532 ARF4P18085 180 aaPredicted RBP20.6■□□□□ 0.89
CCDC188-202ENST00000444532 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
CCDC188-202ENST00000444532 UBA7P41226 1012 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 UBE3AQ05086 875 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 AAK1Q2M2I8 961 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 RINT1Q6NUQ1 792 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 KCNK18Q7Z418 384 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 CABP7Q86V35 215 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 BSNDQ8WZ55 320 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 CPB2Q96IY4 423 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 TIPINQ9BVW5 301 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 FZD8Q9H461 694 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 UBN1Q9NPG3 1134 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 HCSTQ9UBK5 93 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 CLIC4Q9Y696 253 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 PLXNA4Q9HCM2 1894 aa20.6■□□□□ 0.89
CCDC188-202ENST00000444532 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms