RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 RARRES1P49788 294 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 NCBP1Q09161 790 aaKnown RBP22.34■■□□□ 1.17
LRCH3-208ENST00000443727 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 KCNT2Q6UVM3 1135 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 GLB1LQ6UWU2 654 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 CATSPER3Q86XQ3 398 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.34■■□□□ 1.17
LRCH3-208ENST00000443727 LPPQ93052 612 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 NACC1Q96RE7 527 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 MINDY3Q9H8M7 445 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 XPNPEP1Q9NQW7 623 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 TLR9Q9NR96 1032 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 FAM50BQ9Y247 325 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 USO1O60763 962 aaKnown RBP22.33■■□□□ 1.17
LRCH3-208ENST00000443727 SPATA31C1P0DKV0 1188 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 U2AF2P26368 475 aaKnown RBP eCLIP22.33■■□□□ 1.177e-11■■■■■ 32.2
LRCH3-208ENST00000443727 GTF2F1P35269 517 aaKnown RBP eCLIP22.33■■□□□ 1.17
LRCH3-208ENST00000443727 MCM2P49736 904 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 KRT17Q04695 432 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 NBR1Q14596 966 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 COL19A1Q14993 1142 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 RBM23Q86U06 439 aaKnown RBP22.33■■□□□ 1.17
LRCH3-208ENST00000443727 PGBD4Q96DM1 585 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 POLR3CQ9BUI4 534 aaPredicted RBP22.33■■□□□ 1.17
LRCH3-208ENST00000443727 SPG21Q9NZD8 308 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 PCDHB2Q9Y5E7 798 aa22.33■■□□□ 1.17
LRCH3-208ENST00000443727 BDP1A6H8Y1 2624 aa22.33■■□□□ 1.16
LRCH3-208ENST00000443727 INO80B-WBP1J3KQ70 363 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 MED24O75448 989 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 PBX3P40426 434 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 NRIP1P48552 1158 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 ALDH7A1P49419 539 aaKnown RBP22.32■■□□□ 1.16
LRCH3-208ENST00000443727 RSPH1Q8WYR4 309 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 TBC1D32Q96NH3 1257 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 POLR3FQ9H1D9 316 aaPredicted RBP22.32■■□□□ 1.16
LRCH3-208ENST00000443727 TLE6Q9H808 572 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 INPP5FQ9Y2H2 1132 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 PCDHGC5Q9Y5F6 944 aa22.32■■□□□ 1.16
LRCH3-208ENST00000443727 GRXCR2A6NFK2 248 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 H3BQV1 296 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 ZNF623O75123 536 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 ARL2P36404 184 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 NDUFV1P49821 464 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 PTENP60484 403 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 PLCB3Q01970 1234 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 RNASELQ05823 741 aaKnown RBP22.31■■□□□ 1.16
LRCH3-208ENST00000443727 CLUL1Q15846 466 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 CTC1Q2NKJ3 1217 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 HAUS3Q68CZ6 603 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 PDE12Q6L8Q7 609 aaKnown RBP22.31■■□□□ 1.16
LRCH3-208ENST00000443727 POTEGQ6S5H5 508 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 MAEAQ7L5Y9 396 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 ADGRD2Q7Z7M1 963 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 ASAP3Q8TDY4 903 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 MRPS27Q92552 414 aaKnown RBP22.31■■□□□ 1.16
LRCH3-208ENST00000443727 ENTPD7Q9NQZ7 604 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 DBR1Q9UK59 544 aaKnown RBP22.31■■□□□ 1.16
LRCH3-208ENST00000443727 LZTS1Q9Y250 596 aa22.31■■□□□ 1.16
LRCH3-208ENST00000443727 LINC01565O15544 149 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
LRCH3-208ENST00000443727 IL9P15248 144 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 RPA1P27694 616 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 LTBRP36941 435 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 ERVFC1P60507 584 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 CAPSQ13938 189 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 PCBP1Q15365 356 aaKnown RBP eCLIP22.3■■□□□ 1.16
LRCH3-208ENST00000443727 NOMO2Q5JPE7 1267 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 MCPH1Q8NEM0 835 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 RAB34Q9BZG1 259 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 LRWD1Q9UFC0 647 aa22.3■■□□□ 1.16
LRCH3-208ENST00000443727 ARID2Q68CP9 1835 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 ARHGEF35A5YM69 484 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 ZC3H11AO75152 810 aaKnown RBP eCLIP22.29■■□□□ 1.16
LRCH3-208ENST00000443727 GLRA2P23416 452 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 GJB2P29033 226 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 HOXA11P31270 313 aaPredicted RBP22.29■■□□□ 1.16
LRCH3-208ENST00000443727 CCT6AP40227 531 aaKnown RBP22.29■■□□□ 1.16
LRCH3-208ENST00000443727 FXR2P51116 673 aaKnown RBP eCLIP22.29■■□□□ 1.16
LRCH3-208ENST00000443727 POU5F1BQ06416 359 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 PTGDRQ13258 359 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 ADAM15Q13444 863 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 PLPP4Q5VZY2 271 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 NOTUMQ6P988 496 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 EFHBQ8N7U6 833 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 URGCPQ8TCY9 931 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 TCF25Q9BQ70 676 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 SMC3Q9UQE7 1217 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 PCDHB6Q9Y5E3 794 aa22.29■■□□□ 1.16
LRCH3-208ENST00000443727 LRRIQ4A6NIV6 560 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 MEIS3P2A8K0S8 358 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 TSPAN1O60635 241 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 AXLP30530 894 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 SSTR3P32745 418 aaPredicted RBP22.28■■□□□ 1.16
LRCH3-208ENST00000443727 TOB1P50616 345 aaPredicted RBP22.28■■□□□ 1.16
LRCH3-208ENST00000443727 BCAR1P56945 870 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 DLX2Q07687 328 aaPredicted RBP22.28■■□□□ 1.16
LRCH3-208ENST00000443727 C4orf32Q8N8J7 132 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 GBP3Q9H0R5 595 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
LRCH3-208ENST00000443727 TBC1D13Q9NVG8 400 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms