RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 KBTBD4Q9NVX7 518 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 SERTAD1Q9UHV2 236 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 USP20Q9Y2K6 914 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 CHD9Q3L8U1 2897 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 INO80B-WBP1J3KQ70 363 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 B4GALT5O43286 388 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 PLS3P13797 630 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
USP39-205ENST00000442708 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 ZNF131P52739 623 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 PPP2R5AQ15172 486 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 LRIT3Q3SXY7 679 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 LONRF3Q496Y0 759 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 CATSPER4Q7RTX7 472 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 CRIPAKQ8N1N5 446 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 DEPTORQ8TB45 409 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 IFT74Q96LB3 600 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 INO80BQ9C086 356 aaPredicted RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 MTIF3Q9H2K0 278 aaKnown RBP17.71■□□□□ 0.43
USP39-205ENST00000442708 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
USP39-205ENST00000442708 COL4A6Q14031 1691 aa17.71■□□□□ 0.42
USP39-205ENST00000442708 CCDC169A6NNP5 214 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 SLC16A4O15374 487 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 TSPAN1O60635 241 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 EFCAB14O75071 495 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
USP39-205ENST00000442708 CASP1P29466 404 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 KCNJ6P48051 423 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 RABGGTBP53611 331 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 ODR4Q5SWX8 454 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 MYOCDQ8IZQ8 938 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 FIZ1Q96SL8 496 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 NTPCRQ9BSD7 190 aaKnown RBP17.7■□□□□ 0.42
USP39-205ENST00000442708 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 FZD8Q9H461 694 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 CUEDC2Q9H467 287 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 RGS18Q9NS28 235 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 AGPAT5Q9NUQ2 364 aa17.7■□□□□ 0.42
USP39-205ENST00000442708 LAMA3Q16787 3333 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 DENND3A2RUS2 1198 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 C9IYK1 514 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 AMHP03971 560 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 KRT18P05783 430 aaKnown RBP17.69■□□□□ 0.42
USP39-205ENST00000442708 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 MYOGP15173 224 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 PBX2P40425 430 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 DMP1Q13316 513 aaPredicted RBP17.69■□□□□ 0.42
USP39-205ENST00000442708 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 HERC6Q8IVU3 1022 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 TMEM161BQ8NDZ6 487 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 SLC9A7Q96T83 725 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 C17orf75Q9HAS0 396 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 ARHGAP28Q9P2N2 729 aa17.69■□□□□ 0.42
USP39-205ENST00000442708 PIN4Q9Y237 131 aaKnown RBP17.69■□□□□ 0.42
USP39-205ENST00000442708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
USP39-205ENST00000442708 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.68■□□□□ 0.42
USP39-205ENST00000442708 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.68■□□□□ 0.42
USP39-205ENST00000442708 FAM13AO94988 1023 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
USP39-205ENST00000442708 LIG1P18858 919 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 SYKP43405 635 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 AFMP43652 599 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 FAM189BP81408 668 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 FAM187BQ17R55 369 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 UBXN11Q5T124 520 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 ZBTB8OSQ8IWT0 167 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 MYCT1Q8N699 235 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 PHOSPHO2Q8TCD6 241 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 SPIRE2Q8WWL2 714 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 C2orf40Q9H1Z8 148 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 KMT5AQ9NQR1 393 aa17.68■□□□□ 0.42
USP39-205ENST00000442708 TBCAO75347 108 aaKnown RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 ERLIN2O94905 339 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 UPP2O95045 317 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 PRKCBP05771 671 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 IBSPP21815 317 aaPredicted RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 NT5DC1Q5TFE4 455 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 CNNM4Q6P4Q7 775 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 SLC24A5Q71RS6 500 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 CDR2LQ86X02 465 aaPredicted RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
USP39-205ENST00000442708 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
USP39-205ENST00000442708 LRCH3Q96II8 777 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms