RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 C21orf59P57076 290 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 ZNF844Q08AG5 666 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 PCGF5Q86SE9 256 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 HORMAD1Q86X24 394 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 SCUBE1Q8IWY4 988 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 ALG13Q9NP73 1137 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 ZNF652Q9Y2D9 606 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 CAB39Q9Y376 341 aaPredicted RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 MYOM2P54296 1465 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 M0R3G1 203 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 DDAH1O94760 285 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 USP11P51784 963 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 MYL7Q01449 175 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 C4orf33Q8N1A6 199 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 PRPF18Q99633 342 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 BRD8Q9H0E9 1235 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 DNAAF2Q9NVR5 837 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 FAM53CQ9NYF3 392 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 HEY2Q9UBP5 337 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 STK36Q9NRP7 1315 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 H7C0C1 242 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 ITIH2P19823 946 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 PSMC2P35998 433 aaKnown RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 ATP5OP48047 213 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 TBX2Q13207 712 aaPredicted RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 ITGB3BPQ13352 177 aaPredicted RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 RASGRF1Q13972 1273 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 OASLQ15646 514 aaKnown RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 RIBC1Q8N443 379 aaPredicted RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 INPP5DQ92835 1189 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 CFAP36Q96G28 342 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 FBXO2Q9UK22 296 aaPredicted RBP10.96□□□□□ -0.65
LIN54-202ENST00000442461 WDR37Q9Y2I8 494 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 DUSP10Q9Y6W6 482 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 A8MXQ7 604 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 GOLGA8HP0CJ92 632 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 EPHB2P29323 1055 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 NAB2Q15742 525 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 PLBD2Q8NHP8 589 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 CENPTQ96BT3 561 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 EPAS1Q99814 870 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 CARD8Q9Y2G2 431 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
LIN54-202ENST00000442461 SNX3O60493 162 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 KLHL2O95198 593 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 HLA-DOAP06340 250 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 CCDC166P0CW27 439 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 PSMC3P17980 439 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 BPIFB4P59827 614 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 KRT76Q01546 638 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 RNF220Q5VTB9 566 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.96□□□□□ -0.66
LIN54-202ENST00000442461 DNAJC7Q99615 494 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 PARVGQ9HBI0 331 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 TEKT2Q9UIF3 430 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 ZNF180Q9UJW8 692 aa10.96□□□□□ -0.66
LIN54-202ENST00000442461 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.66
LIN54-202ENST00000442461 DNMT1P26358 1616 aaKnown RBP10.96□□□□□ -0.66
LIN54-202ENST00000442461 C16orf96A6NNT2 1141 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 MGRN1O60291 552 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 PHF2O75151 1096 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 PTK2Q05397 1052 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 UBE3CQ15386 1083 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 LACTB2Q53H82 288 aaPredicted RBP10.95□□□□□ -0.66
LIN54-202ENST00000442461 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 ACAD11Q709F0 780 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 FRA10AC1Q70Z53 315 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 EXOC8Q8IYI6 725 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 SIX6OS1Q8N1H7 587 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
LIN54-202ENST00000442461 ZFYVE19Q96K21 471 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 CCDC28BQ9BUN5 200 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 PPCSQ9HAB8 311 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 PCDH11XQ9BZA7 1347 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 ARHGEF10O15013 1369 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 A0A1W2PQJ5 194 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 ZNF233A6NK53 670 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 TNFAIP8O95379 198 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 KLRC1P26715 233 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 MFAP3P55082 362 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 GPC5P78333 572 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 IZUMO3Q5VZ72 239 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 CATSPER3Q86XQ3 398 aa10.95□□□□□ -0.66
LIN54-202ENST00000442461 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms