RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 DNM2P50570 870 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 SOX10P56693 466 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 GTF2BQ00403 316 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 UBXN1Q04323 297 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 TBC1D8BQ0IIM8 1120 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 PLCB4Q15147 1175 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 PTPN21Q16825 1174 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 PRAMEF19Q5SWL8 479 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 KSR1Q8IVT5 923 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 C17orf53Q8N3J3 647 aaPredicted RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
CCDC39-201ENST00000442201 UBXN6Q9BZV1 441 aa8.85□□□□□ -0.99
CCDC39-201ENST00000442201 LOXHD1Q8IVV2 1947 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 H0YCG3 227 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 MAFO75444 373 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 CTGFP29279 349 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 PBX1P40424 430 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 BMS1Q14692 1282 aaKnown RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 MAN2A1Q16706 1144 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 CCDC150Q8NCX0 1101 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 HVCN1Q96D96 273 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 JPH2Q9BR39 696 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 ST7Q9NRC1 585 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 RRP15Q9Y3B9 282 aaKnown RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 ZMYM2Q9UBW7 1377 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 CLIC2O15247 247 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 GAS2O43903 313 aaKnown RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF865P0CJ78 1059 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 SFPQP23246 707 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 ABCD1P33897 745 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 KIF22Q14807 665 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 PPP2R5AQ15172 486 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 NFIL3Q16649 462 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 FKBP15Q5T1M5 1219 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 TMEM143Q96AN5 459 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 ZNF215Q9UL58 517 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-201ENST00000442201 EXOC7Q9UPT5 735 aa8.84□□□□□ -0.99
CCDC39-201ENST00000442201 DOCK5Q9H7D0 1870 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 DENND3A2RUS2 1198 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 DYNC1LI2O43237 492 aaPredicted RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 TBC1D8O95759 1140 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MAP2K2P36507 400 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 SP3Q02447 781 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MTA1Q13330 715 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 VWA3BQ502W6 1294 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 CACTINQ8WUQ7 758 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 ARHGAP39Q9C0H5 1083 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 NDST4Q9H3R1 872 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MCM3APO60318 1980 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 ITIH6Q6UXX5 1313 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 A0A1W2PQC6 194 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 SCP2P22307 547 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 ARL2P36404 184 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 ARID5BQ14865 1188 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 DGKDQ16760 1214 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 CEP135Q66GS9 1140 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 PPFIBP1Q86W92 1011 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 LRRC8AQ8IWT6 810 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TCP11Q8WWU5 503 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 IKZF4Q9H2S9 585 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 KCNF1Q9H3M0 494 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 METTL14Q9HCE5 456 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 PSD3Q9NYI0 1048 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 ARMCX3Q9UH62 379 aaPredicted RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 FAM184BQ9ULE4 1060 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TBX20Q9UMR3 447 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC39-201ENST00000442201 PLXNA1Q9UIW2 1896 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 H3BRB1 525 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 SLC16A3O15427 465 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 ADCY6O43306 1168 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 NRDCO43847 1150 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MMP3P08254 477 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TPM1P09493 284 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 EPB41P11171 864 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 HOXD8P13378 290 aaPredicted RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 NAMPTP43490 491 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 FLT3LGP49771 235 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 SNRPFP62306 86 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 LRMPQ12912 555 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TBX2Q13207 712 aaPredicted RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 MYBPC2Q14324 1141 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 ZNF484Q5JVG2 852 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MIIPQ5JXC2 388 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 IER5Q5VY09 327 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 FRMD5Q7Z6J6 570 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 MAP4K3Q8IVH8 894 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TRIM59Q8IWR1 403 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 RNPEPQ9H4A4 650 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 TUT1Q9H6E5 874 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 SUGCTQ9HAC7 445 aa8.83□□□□□ -1
CCDC39-201ENST00000442201 GNEQ9Y223 722 aaKnown RBP8.83□□□□□ -1
CCDC39-201ENST00000442201 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC39-201ENST00000442201 ZBTB42B2RXF5 422 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms