RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 PTENP60484 403 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 POU5F1BQ06416 359 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 NBR1Q14596 966 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 ABI1Q8IZP0 508 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 HELQQ8TDG4 1101 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 ASAP3Q8TDY4 903 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 CLDND1Q9NY35 253 aa21.07■□□□□ 0.96
HMGB3P22-201ENST00000442010 GRXCR2A6NFK2 248 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 MEIS3P2A8K0S8 358 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 H3BQ06 376 aaPredicted RBP21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 FSCN2O14926 492 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 SKIP12755 728 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 IL9P15248 144 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 RPA1P27694 616 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 RAB27AP51159 221 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 DLX2Q07687 328 aaPredicted RBP21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 KCNT2Q6UVM3 1135 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 THNSL1Q8IYQ7 743 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 LPPQ93052 612 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 UPF2Q9HAU5 1272 aaKnown RBP21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 DBR1Q9UK59 544 aaKnown RBP21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 LZTS1Q9Y250 596 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 PCDHGC5Q9Y5F6 944 aa21.06■□□□□ 0.96
HMGB3P22-201ENST00000442010 LINC01565O15544 149 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 TBX10O75333 385 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 GLRA2P23416 452 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 FXR2P51116 673 aaKnown RBP eCLIP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 ERVFC1P60507 584 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 ADAM15Q13444 863 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 GNL2Q13823 731 aaKnown RBP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 CAPSQ13938 189 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 PTCRAQ6ISU1 281 aaPredicted RBP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 MRPL10Q7Z7H8 261 aaKnown RBP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 RSPH1Q8WYR4 309 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 TLR9Q9NR96 1032 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 PCDHB6Q9Y5E3 794 aa21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 TDRD15B5MCY1 1934 aaKnown RBP21.05■□□□□ 0.96
HMGB3P22-201ENST00000442010 PBX3P40426 434 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 PCBP1Q15365 356 aaKnown RBP eCLIP21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 PUS10Q3MIT2 529 aaKnown RBP21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 MRPS27Q92552 414 aaKnown RBP21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 ZNF558Q96NG5 402 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 IGFLR1Q9H665 355 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 PCDHB2Q9Y5E7 798 aa21.04■□□□□ 0.96
HMGB3P22-201ENST00000442010 C5orf42Q9H799 3197 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 TSPAN1O60635 241 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 OFD1O75665 1012 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 MCM2P49736 904 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 MBTD1Q05BQ5 628 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 ECM1Q16610 540 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 AMHR2Q16671 573 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 LONRF3Q496Y0 759 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 POTEGQ6S5H5 508 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 AGMOQ6ZNB7 445 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 FAM178BQ8IXR5 827 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 SLC39A11Q8N1S5 342 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 EFHBQ8N7U6 833 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 ERMNQ8TAM6 284 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 PPP2R3CQ969Q6 453 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 CD320Q9NPF0 282 aa21.03■□□□□ 0.96
HMGB3P22-201ENST00000442010 USO1O60763 962 aaKnown RBP21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 MUTP22033 750 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 GJB2P29033 226 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 PPM1AP35813 382 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 PTGDRQ13258 359 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 TFDP1Q14186 410 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 PDE12Q6L8Q7 609 aaKnown RBP21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 EP400NLQ6ZTU2 488 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 IGSF22Q8N9C0 903 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 CCDC43Q96MW1 224 aaKnown RBP21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 POLR3FQ9H1D9 316 aaPredicted RBP21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 GPRC5CQ9NQ84 441 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 TBC1D13Q9NVG8 400 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 SPG21Q9NZD8 308 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 KIF3AQ9Y496 699 aa21.02■□□□□ 0.96
HMGB3P22-201ENST00000442010 GLP2RO95838 553 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 AXLP30530 894 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 NRIP1P48552 1158 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 PDIA5Q14554 519 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 IL17AQ16552 155 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 NOMO2Q5JPE7 1267 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 GLB1LQ6UWU2 654 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 SMG8Q8ND04 991 aaKnown RBP21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 PGBD4Q96DM1 585 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 MSLNLQ96KJ4 702 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 NRDE2Q9H7Z3 1164 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 CLEC1BQ9P126 229 aa21.01■□□□□ 0.95
HMGB3P22-201ENST00000442010 INO80B-WBP1J3KQ70 363 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 ERLIN2O94905 339 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 NCLP19338 710 aaKnown RBP21■□□□□ 0.95
HMGB3P22-201ENST00000442010 BCAR1P56945 870 aa21■□□□□ 0.95
HMGB3P22-201ENST00000442010 KCNC3Q14003 757 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms