RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CCT6AP40227 531 aaKnown RBP20.25■□□□□ 0.83
SMPD4-210ENST00000441135 UBE3AQ05086 875 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 KRT79Q5XKE5 535 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 LRRC43Q8N309 656 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 SPPL3Q8TCT6 385 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 RSPH1Q8WYR4 309 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 CCDC43Q96MW1 224 aaKnown RBP20.25■□□□□ 0.83
SMPD4-210ENST00000441135 MTRQ99707 1265 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 ZBTB39O15060 712 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 CAMK1Q14012 370 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
SMPD4-210ENST00000441135 HYIQ5T013 277 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 POTEGQ6S5H5 508 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 SNX29Q8TEQ0 813 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 XPNPEP1Q9NQW7 623 aa20.24■□□□□ 0.83
SMPD4-210ENST00000441135 TYW1Q9NV66 732 aaKnown RBP20.24■□□□□ 0.83
SMPD4-210ENST00000441135 CSDE1O75534 798 aaKnown RBP20.23■□□□□ 0.83
SMPD4-210ENST00000441135 SKIP12755 728 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 HYAL1Q12794 435 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 MXD4Q14582 209 aaPredicted RBP20.23■□□□□ 0.83
SMPD4-210ENST00000441135 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
SMPD4-210ENST00000441135 KSR1Q8IVT5 923 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 COLGALT1Q8NBJ5 622 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 MCPH1Q8NEM0 835 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 PIGOQ8TEQ8 1089 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 POF1BQ8WVV4 589 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
SMPD4-210ENST00000441135 CASD1Q96PB1 797 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 CLDND1Q9NY35 253 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
SMPD4-210ENST00000441135 KIAA1671Q9BY89 1806 aa20.23■□□□□ 0.83
SMPD4-210ENST00000441135 DNAJB1P25685 340 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 LONP1P36776 959 aaKnown RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 RAB27AP51159 221 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 PTPAQ15257 358 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 CTC1Q2NKJ3 1217 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 TWF2Q6IBS0 349 aaKnown RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 PTCRAQ6ISU1 281 aaPredicted RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 EP400NLQ6ZTU2 488 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 SRGAP1Q7Z6B7 1085 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 THNSL1Q8IYQ7 743 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 MMTAG2Q9BU76 263 aaKnown RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 MRPL9Q9BYD2 267 aaKnown RBP20.22■□□□□ 0.83
SMPD4-210ENST00000441135 CWH43Q9H720 699 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 IFT122Q9HBG6 1241 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 FAM50BQ9Y247 325 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 MUC3AQ02505 3323 aa20.22■□□□□ 0.83
SMPD4-210ENST00000441135 VWA3AA6NCI4 1184 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 H3BQ06 376 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 FGF18O76093 207 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 CSPG5O95196 566 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 ATF7P17544 494 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 PPM1AP35813 382 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 PHKA2P46019 1235 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 LAMTOR4Q0VGL1 99 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 PCBP1Q15365 356 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 ECM1Q16610 540 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 CLLU1OSQ5K130 101 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 IFNLR1Q8IU57 520 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 NT5C3AQ9H0P0 336 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 HCSTQ9UBK5 93 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 KIAA1024Q9UPX6 916 aa20.21■□□□□ 0.83
SMPD4-210ENST00000441135 FNDC1Q4ZHG4 1894 aaPredicted RBP20.21■□□□□ 0.83
SMPD4-210ENST00000441135 ARHGEF35A5YM69 484 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 GRXCR2A6NFK2 248 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 ZSCAN22P10073 491 aaPredicted RBP20.2■□□□□ 0.82
SMPD4-210ENST00000441135 ARL2P36404 184 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 BECN1Q14457 450 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 PDE12Q6L8Q7 609 aaKnown RBP20.2■□□□□ 0.82
SMPD4-210ENST00000441135 ZNF558Q96NG5 402 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 NFKBIZQ9BYH8 718 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 TLR9Q9NR96 1032 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 DDX19AQ9NUU7 478 aaKnown RBP20.2■□□□□ 0.82
SMPD4-210ENST00000441135 DNM3Q9UQ16 869 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 LZTS1Q9Y250 596 aa20.2■□□□□ 0.82
SMPD4-210ENST00000441135 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 USO1O60763 962 aaKnown RBP20.19■□□□□ 0.82
SMPD4-210ENST00000441135 EYA4O95677 639 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 SRGAP2CP0DJJ0 459 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 CYP11B2P19099 503 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 IRS1P35568 1242 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
SMPD4-210ENST00000441135 PLCB3Q01970 1234 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 TFDP1Q14186 410 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 PADI6Q6TGC4 694 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 KCNT2Q6UVM3 1135 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 LRRC55Q6ZSA7 311 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
SMPD4-210ENST00000441135 HELQQ8TDG4 1101 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms