RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
UBE2D4-204ENST00000440899 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.33
UBE2D4-204ENST00000440899 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 C2orf71A6NGG8 1288 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 M0R296 226 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 RFC5P40937 340 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 ZXDAP98168 799 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 OTUD6AQ7L8S5 288 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 PRPF31Q8WWY3 499 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 WASF1Q92558 559 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 HAS1Q92839 578 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 LPPQ93052 612 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 TECTAO75443 2155 aa13.01□□□□□ -0.33
UBE2D4-204ENST00000440899 ASAP2O43150 1006 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 GAS2O43903 313 aaKnown RBP13□□□□□ -0.33
UBE2D4-204ENST00000440899 OFD1O75665 1012 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 ANAPC15P60006 121 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 RNASELQ05823 741 aaKnown RBP13□□□□□ -0.33
UBE2D4-204ENST00000440899 ITIH3Q06033 890 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 LONRF3Q496Y0 759 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 CES5AQ6NT32 575 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 SRGAP1Q7Z6B7 1085 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 DDX53Q86TM3 631 aaKnown RBP13□□□□□ -0.33
UBE2D4-204ENST00000440899 SLFN12Q8IYM2 578 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 VPS52Q8N1B4 723 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
UBE2D4-204ENST00000440899 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 TMEM143Q96AN5 459 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 FBXL18Q96ME1 805 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 LXNQ9BS40 222 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 APOL5Q9BWW9 433 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 GJB4Q9NTQ9 266 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 TBC1D13Q9NVG8 400 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
UBE2D4-204ENST00000440899 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 HCFC2Q9Y5Z7 792 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 IRAK3Q9Y616 596 aa13□□□□□ -0.33
UBE2D4-204ENST00000440899 MEIS3P2A8K0S8 358 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 CLASP2O75122 1294 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 NEFLP07196 543 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 GALTP07902 379 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 CA8P35219 290 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 LAMTOR4Q0VGL1 99 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 GIT2Q14161 759 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 DYDC2Q96IM9 177 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 NECTIN4Q96NY8 510 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 ZBP1Q9H171 429 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 NRDE2Q9H7Z3 1164 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 RGL1Q9NZL6 768 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 PCDHB2Q9Y5E7 798 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 ZNF318Q5VUA4 2279 aa12.99□□□□□ -0.33
UBE2D4-204ENST00000440899 ZDBF2Q9HCK1 2354 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 DTNBO60941 627 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 CTSAP10619 480 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 KRT2P35908 639 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 MTHFRP42898 656 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 AK2P54819 239 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 NHLH1Q02575 133 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 EMC2Q15006 297 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 PTPN21Q16825 1174 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 EARS2Q5JPH6 523 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 AGMOQ6ZNB7 445 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 SUGP1Q8IWZ8 645 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 RIPOR3Q96MK2 946 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 DZANK1Q9NVP4 752 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms