RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 DGKIO75912 1065 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 ERLIN2O94905 339 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 TXLNAP40222 546 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 CACNB1Q02641 598 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-205ENST00000440514 CDCA2Q69YH5 1023 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-205ENST00000440514 TWF2Q6IBS0 349 aaKnown RBP19.96■□□□□ 0.79
CPSF4-205ENST00000440514 FAM43BQ6ZT52 329 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-205ENST00000440514 RNF169Q8NCN4 708 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 NFKBIZQ9BYH8 718 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 PRDM12Q9H4Q4 367 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 CHST12Q9NRB3 414 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 MTUS1Q9ULD2 1270 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 PCDHB7Q9Y5E2 793 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 KIAA1671Q9BY89 1806 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 A0A087X0B3 334 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 B4GALT5O43286 388 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 FGFR1P11362 822 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
CPSF4-205ENST00000440514 GUCY2CP25092 1073 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 NAMPTP43490 491 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 AMHR2Q16671 573 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
CPSF4-205ENST00000440514 ATL3Q6DD88 541 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 GPBP1Q86WP2 473 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 ECHDC2Q86YB7 292 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 DEPTORQ8TB45 409 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 KCNG4Q8TDN1 519 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 MYLIPQ8WY64 445 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 ZNF689Q96CS4 500 aaPredicted RBP19.95■□□□□ 0.78
CPSF4-205ENST00000440514 CPB2Q96IY4 423 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 CDX2Q99626 313 aaPredicted RBP19.95■□□□□ 0.78
CPSF4-205ENST00000440514 TMEM161AQ9NX61 479 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 DACT1Q9NYF0 836 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 CCDC39Q9UFE4 941 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 CDH23Q9H251 3354 aa19.95■□□□□ 0.78
CPSF4-205ENST00000440514 FNDC1Q4ZHG4 1894 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-205ENST00000440514 EPOPA6NHQ4 379 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 CUTAO60888 179 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 ATF7P17544 494 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-205ENST00000440514 HOXA11P31270 313 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-205ENST00000440514 DDIT3P35638 169 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 FAM189BP81408 668 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 PPP2R5AQ15172 486 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 ARSHQ5FYA8 562 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 ZBTB8OSQ8IWT0 167 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 ARNTL2Q8WYA1 636 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 LARP4BQ92615 738 aaKnown RBP19.94■□□□□ 0.78
CPSF4-205ENST00000440514 IFT74Q96LB3 600 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 DRC1Q96MC2 740 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 C17orf80Q9BSJ5 609 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 RNF19AQ9NV58 838 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 RALGAPA2Q2PPJ7 1873 aa19.94■□□□□ 0.78
CPSF4-205ENST00000440514 CHD9Q3L8U1 2897 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 SFI1A8K8P3 1242 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 LIG1P18858 919 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 ME1P48163 572 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 PEX3P56589 373 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 BTG3Q14201 252 aaPredicted RBP19.93■□□□□ 0.78
CPSF4-205ENST00000440514 NAALADL2Q58DX5 795 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 UBXN11Q5T124 520 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 AXDND1Q5T1B0 1012 aaPredicted RBP19.93■□□□□ 0.78
CPSF4-205ENST00000440514 SHC4Q6S5L8 630 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 TGS1Q96RS0 853 aaKnown RBP19.93■□□□□ 0.78
CPSF4-205ENST00000440514 REEP2Q9BRK0 252 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 TIPINQ9BVW5 301 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 PANK2Q9BZ23 570 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 CCDC113Q9H0I3 377 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 C2orf40Q9H1Z8 148 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 ELAC1Q9H777 363 aaKnown RBP19.93■□□□□ 0.78
CPSF4-205ENST00000440514 FAM105AQ9NUU6 356 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 STK17AQ9UEE5 414 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 MYH11P35749 1972 aa19.93■□□□□ 0.78
CPSF4-205ENST00000440514 A0A0U1RQF3 1178 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 CCDC169A6NNP5 214 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 TBKBP1A7MCY6 615 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 RFXAPO00287 272 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 EDN1P05305 212 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 ARF4P18085 180 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 NPTX2P47972 431 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 KRT85P78386 507 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 LONRF3Q496Y0 759 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 RRAGBQ5VZM2 374 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 ZNF598Q86UK7 904 aaKnown RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 CDR2LQ86X02 465 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 CMTR2Q8IYT2 770 aaKnown RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 FIBCD1Q8N539 461 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 PDILTQ8N807 584 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 TRAIPQ9BWF2 469 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 PRMT7Q9NVM4 692 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 KCND2Q9NZV8 630 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 PCDHA7Q9UN72 937 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 USP20Q9Y2K6 914 aa19.92■□□□□ 0.78
CPSF4-205ENST00000440514 MRPL42Q9Y6G3 142 aaKnown RBP19.92■□□□□ 0.78
CPSF4-205ENST00000440514 TTLL13PA6NNM8 815 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 PRKCBP05771 671 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 STAT6P42226 847 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 RAB27AP51159 221 aa19.91■□□□□ 0.78
CPSF4-205ENST00000440514 ERVK-21P61565 698 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms