RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 SKAP2O75563 359 aaPredicted RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 BIRC3Q13489 604 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 KIAA1755Q5JYT7 1200 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 hCG_1984214I3L0E3 225 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 CHUKO15111 745 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 NDUFB10O96000 172 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 CCDC172P0C7W6 258 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 PHLDB3Q6NSJ2 640 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 PRUNE1Q86TP1 453 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 HOOK3Q86VS8 718 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 FUKQ8N0W3 1084 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 ZNF713Q8N859 430 aaPredicted RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 ANKS4BQ8N8V4 417 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 SUCLA2Q9P2R7 463 aaPredicted RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 COMTP21964 271 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 RPL21P46778 160 aaKnown RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 CD302Q8IX05 232 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 TMX4Q9H1E5 349 aaPredicted RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 DNAJC18Q9H819 358 aa19.71■□□□□ 0.75
PTPRJ-202ENST00000440289 LMNB1P20700 586 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 SEL1L2Q5TEA6 688 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 LLGL2Q6P1M3 1020 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 CCDC50Q8IVM0 306 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 ARHGEF35A5YM69 484 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 KRT5P13647 590 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 SCP2P22307 547 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 GABPAQ06546 454 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 DDR1Q08345 913 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 ARHGEF19Q8IW93 802 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 CPXCR1Q8N123 301 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 ETNPPLQ8TBG4 499 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 RASAL2Q9UJF2 1139 aa19.7■□□□□ 0.74
PTPRJ-202ENST00000440289 CLRN2A0PK11 232 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 CYP26A1O43174 497 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 TRIM37O94972 964 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 ORC2Q13416 577 aaPredicted RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 FAM182AQ5T1J6 154 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 FAM47EQ6ZV65 393 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 SAAL1Q96ER3 474 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 KIFC3Q9BVG8 833 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 SLITRK6Q9H5Y7 841 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 USP20Q9Y2K6 914 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 CLDN3O15551 220 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 C10orf76Q5T2E6 689 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 NUGGCQ68CJ6 796 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 PPP1R18Q6NYC8 613 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 LRIG3Q6UXM1 1119 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 CCDC63Q8NA47 563 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 CBWD1Q9BRT8 395 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 ABCF3Q9NUQ8 709 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 FGFR1OP2Q9NVK5 253 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 MTRF1LQ9UGC7 380 aaKnown RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 USTQ9Y2C2 406 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 TNRC6CQ9HCJ0 1690 aaKnown RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 SNHG28P0DPA3 235 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 CLNS1AP54105 237 aaKnown RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 EP400NLQ6ZTU2 488 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 PAXIP1Q6ZW49 1069 aaPredicted RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 SPATS2Q86XZ4 545 aaKnown RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 ATP8B4Q8TF62 1192 aa19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 ATF5Q9Y2D1 282 aaPredicted RBP19.69■□□□□ 0.74
PTPRJ-202ENST00000440289 TCP10L2B9ZVM9 353 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 RASGRF2O14827 1237 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 SGPL1O95470 568 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 PYGMP11217 842 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 GYS1P13807 737 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 IL1R1P14778 569 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 CRKP46108 304 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 ABCB5Q2M3G0 1257 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 PRCCQ92733 491 aaPredicted RBP19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 HES6Q96HZ4 224 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 GPRC5CQ9NQ84 441 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 EZRP15311 586 aaKnown RBP19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 SMARCA1P28370 1054 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 SMTNP53814 917 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 SPIRE1Q08AE8 756 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 MYO1EQ12965 1108 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 CALCOCO2Q13137 446 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 LMBRD2Q68DH5 695 aaPredicted RBP19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 UBL4BQ8N7F7 174 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 CALR3Q96L12 384 aaKnown RBP19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 AGPAT3Q9NRZ7 376 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 WRAP73Q9P2S5 460 aaPredicted RBP19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 APEX2Q9UBZ4 518 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 TCEAL9Q9UHQ7 104 aa19.68■□□□□ 0.74
PTPRJ-202ENST00000440289 SYDE2Q5VT97 1194 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 CYP4F22Q6NT55 531 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 TTC27Q6P3X3 843 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 DHX38Q92620 1227 aaKnown RBP19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 TATDN2Q93075 761 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 ZNF653Q96CK0 615 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 KLHL11Q9NVR0 708 aa19.67■□□□□ 0.74
PTPRJ-202ENST00000440289 CCDC169A6NNP5 214 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms