RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 FUT8Q9BYC5 575 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 RCAN1P53805 252 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 SLC44A4Q53GD3 710 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 NOA1Q8NC60 698 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 LIMA1Q9UHB6 759 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 CPDO75976 1380 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 A0A1W2PQC6 194 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 MAN1A2O60476 641 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 INHBAP08476 426 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 ALX1Q15699 326 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 CAPRIN2Q6IMN6 1127 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 ALKBH5Q6P6C2 394 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 IRX4P78413 519 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 MTRQ99707 1265 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
CCBE1-202ENST00000439986 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 ZNF185O15231 689 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 FGD4Q96M96 766 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 TRIM10Q9UDY6 481 aa12.35□□□□□ -0.43
CCBE1-202ENST00000439986 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TRPA1O75762 1119 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 MSR1P21757 451 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 MTA1Q13330 715 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 PDZD4Q76G19 769 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TMEM110Q86TL2 294 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 HSPH1Q92598 858 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 INO80Q9ULG1 1556 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 GSG1L2A8MUP6 293 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 GFPT2O94808 682 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 APOEP02649 317 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 SLC9A5Q14940 896 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 MCF2L2Q86YR7 1114 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TOM1L1O75674 476 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 KRT1P04264 644 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 CDO1Q16878 200 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 DNAAF3Q8N9W5 541 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 POLIQ9UNA4 740 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 USP17L2Q6R6M4 530 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 CHD1O14646 1710 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 USP17L3A6NCW0 530 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 USP17L4A6NCW7 530 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 GYPCP04921 128 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 EIF3BP55884 814 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 GEMIN4P57678 1058 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 HLFQ16534 295 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 ANO4Q32M45 955 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 ERICH5Q6P6B1 374 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 USP17L1Q7RTZ2 530 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 SZRD1Q7Z422 152 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 RAB44Q7Z6P3 723 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 PPWD1Q96BP3 646 aaKnown RBP12.34□□□□□ -0.43
CCBE1-202ENST00000439986 ZFYVE1Q9HBF4 777 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 ADGRB1O14514 1584 aa12.34□□□□□ -0.43
CCBE1-202ENST00000439986 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 CPP00450 1065 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 MYL3P08590 195 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 UBE2SQ16763 222 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 FAM47EQ6ZV65 393 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 KCTD6Q8NC69 237 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 WDR60Q8WVS4 1066 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 COA7Q96BR5 231 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 CSRNP1Q96S65 589 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.43
CCBE1-202ENST00000439986 TYW1Q9NV66 732 aaKnown RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms