RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 MICAL1Q8TDZ2 1067 aa18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 PRPF31Q8WWY3 499 aaKnown RBP18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 POP1Q99575 1024 aaKnown RBP18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 FAM105AQ9NUU6 356 aa18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 SPG21Q9NZD8 308 aa18.17■□□□□ 0.5
SNRPD3-204ENST00000439775 ARID2Q68CP9 1835 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 CARNS1A5YM72 827 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 ASAP2O43150 1006 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 PBX3P40426 434 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 FOSBP53539 338 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 ERVFC1P60507 584 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 KRT17Q04695 432 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 SAFBQ15424 915 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 DUSP6Q16828 381 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 RBM23Q86U06 439 aaKnown RBP18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 SLC39A11Q8N1S5 342 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 MTRQ99707 1265 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 TCF25Q9BQ70 676 aa18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
SNRPD3-204ENST00000439775 ZBTB39O15060 712 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 TXKP42681 527 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 MXD4Q14582 209 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 PCBP1Q15365 356 aaKnown RBP eCLIP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 TMEM31Q5JXX7 168 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 GLB1LQ6UWU2 654 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 KIF2CQ99661 725 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 MINDY3Q9H8M7 445 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 XPNPEP1Q9NQW7 623 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 ENTPD7Q9NQZ7 604 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 SH2B1Q9NRF2 756 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 BMP2KQ9NSY1 1161 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 BARX2Q9UMQ3 279 aaPredicted RBP18.15■□□□□ 0.5
SNRPD3-204ENST00000439775 C5orf42Q9H799 3197 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 GPR37L1O60883 481 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 DGAT1O75907 488 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 SRGAP2CP0DJJ0 459 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 ALADP13716 330 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 ALDH7A1P49419 539 aaKnown RBP18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 KCNC3Q14003 757 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 PLPP4Q5VZY2 271 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 VN1R2Q8NFZ6 395 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 LPPQ93052 612 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 PGBD4Q96DM1 585 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 C8orf76Q96K31 380 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 C11orf16Q9NQ32 467 aa18.14■□□□□ 0.49
SNRPD3-204ENST00000439775 POTEMA6NI47 508 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 PER2O15055 1255 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 HOXA11P31270 313 aaPredicted RBP18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 RARRES1P49788 294 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 BCAR1P56945 870 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 GUCY1B3Q02153 619 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 POU5F1BQ06416 359 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 NOMO2Q5JPE7 1267 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 TMEM184AQ6ZMB5 413 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 IFNLR1Q8IU57 520 aaPredicted RBP18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 LRFN3Q9BTN0 628 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 TBC1D13Q9NVG8 400 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 PCDHB2Q9Y5E7 798 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 CNTNAP2Q9UHC6 1331 aa18.13■□□□□ 0.49
SNRPD3-204ENST00000439775 MEIS3P2A8K0S8 358 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 OFD1O75665 1012 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 ERLIN2O94905 339 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 MCM7P33993 719 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 PTENP60484 403 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 TFDP1Q14186 410 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 MRPL10Q7Z7H8 261 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 FBXO18Q8NFZ0 1043 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 NFKBIZQ9BYH8 718 aa18.12■□□□□ 0.49
SNRPD3-204ENST00000439775 HIDE1A8MVS5 230 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 DCXO43602 365 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 AXLP30530 894 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 ARL2P36404 184 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 RBM25P49756 843 aaKnown RBP18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 SMC1AQ14683 1233 aaKnown RBP18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 LONRF3Q496Y0 759 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 UBXN11Q5T124 520 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 AGMOQ6ZNB7 445 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 CCDC51Q96ER9 411 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 TMEM169Q96HH4 297 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 TUFT1Q9NNX1 390 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 INPP5FQ9Y2H2 1132 aa18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 USP15Q9Y4E8 981 aaPredicted RBP18.11■□□□□ 0.49
SNRPD3-204ENST00000439775 TSPAN1O60635 241 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms