RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ABI1Q8IZP0 508 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 CASD1Q96PB1 797 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 DHX33Q9H6R0 707 aaKnown RBP12.84□□□□□ -0.35
IRF1-204ENST00000439555 CWH43Q9H720 699 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 RNF19AQ9NV58 838 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 A0A087WZ62 844 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 TMEM150BA6NC51 233 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 ZNF623O75123 536 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 FGF18O76093 207 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 LYPLA2O95372 231 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
IRF1-204ENST00000439555 PPM1AP35813 382 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 NRIP1P48552 1158 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 TRIM29Q14134 588 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 EARS2Q5JPH6 523 aaKnown RBP12.83□□□□□ -0.36
IRF1-204ENST00000439555 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
IRF1-204ENST00000439555 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 COLGALT1Q8NBJ5 622 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 CEP170P1Q96L14 293 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 FDXACB1Q9BRP7 624 aaPredicted RBP12.83□□□□□ -0.36
IRF1-204ENST00000439555 TLE6Q9H808 572 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
IRF1-204ENST00000439555 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
IRF1-204ENST00000439555 BTBD18B2RXH4 712 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 ASAP2O43150 1006 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 LARGE1O95461 756 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 SEC24BO95487 1268 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 NPEPPSP55786 919 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 KCNC3Q14003 757 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.36
IRF1-204ENST00000439555 LRRC55Q6ZSA7 311 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 LXNQ9BS40 222 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 MRPL9Q9BYD2 267 aaKnown RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 WRAP73Q9P2S5 460 aaPredicted RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
IRF1-204ENST00000439555 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
IRF1-204ENST00000439555 FSCN2O14926 492 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 SLITRK3O94933 977 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 SRGAP2BP0DMP2 458 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
IRF1-204ENST00000439555 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 PHKA2P46019 1235 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 RAB27AP51159 221 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 POLGP54098 1239 aaPredicted RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 KRT17Q04695 432 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 CALCRLQ16602 461 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 CLLU1OSQ5K130 101 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 PLA2G4FQ68DD2 849 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 KCNT2Q6UVM3 1135 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 PRPF31Q8WWY3 499 aaKnown RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 NKD2Q969F2 451 aaPredicted RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 ZNF558Q96NG5 402 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 SH2D3AQ9BRG2 576 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 S1PR5Q9H228 398 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
IRF1-204ENST00000439555 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 RGL1Q9NZL6 768 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
IRF1-204ENST00000439555 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 NEMFO60524 1076 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 JAK2O60674 1132 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 CSDE1O75534 798 aaKnown RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 HOXB8P17481 243 aaPredicted RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 FGFR4P22455 802 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 CLCN5P51795 746 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 ERVFC1P60507 584 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 ORC2Q13416 577 aaPredicted RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
IRF1-204ENST00000439555 DUSP6Q16828 381 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 RBM23Q86U06 439 aaKnown RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 DYDC2Q96IM9 177 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 ZSCAN31Q96LW9 406 aaPredicted RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
IRF1-204ENST00000439555 EIF2AK1Q9BQI3 630 aaKnown RBP12.8□□□□□ -0.36
IRF1-204ENST00000439555 TTC12Q9H892 705 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms