RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
HDAC8-214ENST00000439122 PEX3P56589 373 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 PPP3CAQ08209 521 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 MTMR2Q13614 643 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 HLTFQ14527 1009 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC8-214ENST00000439122 PGM5Q15124 567 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 UGCGQ16739 394 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 SYT11Q9BT88 431 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
HDAC8-214ENST00000439122 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
HDAC8-214ENST00000439122 SLC16A4O15374 487 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ATP9AO75110 1047 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 KRT14P02533 472 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 VCAM1P19320 739 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 RFX1P22670 979 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 TNFAIP1Q13829 316 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 LRRC31Q6UY01 552 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 HES6Q96HZ4 224 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 TEPSINQ96N21 525 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 PPP1R9AQ9ULJ8 1098 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 IGSF9BQ9UPX0 1349 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 NCANO14594 1321 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ASTN2O75129 1339 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 GHRHRQ02643 423 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 KIF22Q14807 665 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 XKR9Q5GH70 373 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 PLA2G4FQ68DD2 849 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-214ENST00000439122 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
HDAC8-214ENST00000439122 LYPLA2O95372 231 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 ITGA4P13612 1032 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 USP8P40818 1118 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 PSMC5P62195 406 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 GTF2BQ00403 316 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
HDAC8-214ENST00000439122 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
HDAC8-214ENST00000439122 FOXR1Q6PIV2 292 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 ISCUQ9H1K1 167 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
HDAC8-214ENST00000439122 ANKRD62A6NC57 917 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 CCDC169A6NNP5 214 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 WDR64B1ANS9 1081 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 CCDC188H7C350 402 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
HDAC8-214ENST00000439122 ZBED4O75132 1171 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
HDAC8-214ENST00000439122 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 C12orf56Q8IXR9 622 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 RASGEF1CQ8N431 466 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 AMACRQ9UHK6 382 aa13.13□□□□□ -0.31
HDAC8-214ENST00000439122 CCNE2O96020 404 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 FGGP02679 453 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 MXI1P50539 228 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 JAK3P52333 1124 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 CUL1Q13616 776 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 SKIDA1Q1XH10 827 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 C1orf220Q5T0J3 134 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 DDX42Q86XP3 938 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDAC8-214ENST00000439122 MREGQ8N565 214 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 IWS1Q96ST2 819 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 P4HA2O15460 535 aa13.12□□□□□ -0.31
HDAC8-214ENST00000439122 SFNP31947 248 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms