RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 ATP2A2P16615 1042 aaKnown RBP18.68■□□□□ 0.58
TARDBP-203ENST00000439080 GIT2Q14161 759 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 MYOCDQ8IZQ8 938 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 C2orf40Q9H1Z8 148 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 TSPYL2Q9H2G4 693 aaPredicted RBP18.68■□□□□ 0.58
TARDBP-203ENST00000439080 GOLPH3LQ9H4A5 285 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 C17orf75Q9HAS0 396 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 MAGEF1Q9HAY2 307 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 AGPAT5Q9NUQ2 364 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 PIN4Q9Y237 131 aaKnown RBP18.68■□□□□ 0.58
TARDBP-203ENST00000439080 FNDC1Q4ZHG4 1894 aaPredicted RBP18.68■□□□□ 0.58
TARDBP-203ENST00000439080 COL4A6Q14031 1691 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 CCDC169A6NNP5 214 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 SFI1A8K8P3 1242 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 ERLIN2O94905 339 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 FAM13AO94988 1023 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 PLS3P13797 630 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 NPTX2P47972 431 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 NDUFA8P51970 172 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 CSPP1Q1MSJ5 1256 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 LRIT3Q3SXY7 679 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 DYMQ7RTS9 669 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 TMCO2Q7Z6W1 182 aaPredicted RBP18.68■□□□□ 0.58
TARDBP-203ENST00000439080 DDX12PQ92771 950 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 STAMQ92783 540 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 ADAM2Q99965 735 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 KBTBD4Q9NVX7 518 aa18.68■□□□□ 0.58
TARDBP-203ENST00000439080 CHD9Q3L8U1 2897 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 NLRC5Q86WI3 1866 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 KIAA1671Q9BY89 1806 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 SZT2Q5T011 3432 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 PHLPP2Q6ZVD8 1323 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 TSPAN1O60635 241 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 ZNF131P52739 623 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 DSC3Q14574 896 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 PCBP1Q15365 356 aaKnown RBP eCLIP18.67■□□□□ 0.58
TARDBP-203ENST00000439080 HABP4Q5JVS0 413 aaKnown RBP18.67■□□□□ 0.58
TARDBP-203ENST00000439080 FAM43BQ6ZT52 329 aaPredicted RBP18.67■□□□□ 0.58
TARDBP-203ENST00000439080 PHOSPHO2Q8TCD6 241 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 CCDC113Q9H0I3 377 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 ZHX3Q9H4I2 956 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 PARVGQ9HBI0 331 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 KMT5AQ9NQR1 393 aa18.67■□□□□ 0.58
TARDBP-203ENST00000439080 LARSQ9P2J5 1176 aaKnown RBP18.67■□□□□ 0.58
TARDBP-203ENST00000439080 CDH23Q9H251 3354 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 GRXCR1A8MXD5 290 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 ENPP3O14638 875 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
TARDBP-203ENST00000439080 ZSCAN20P17040 1043 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-203ENST00000439080 SYKP43405 635 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 AMHR2Q16671 573 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 RTN4RL1Q86UN2 441 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-203ENST00000439080 HERC6Q8IVU3 1022 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 CEP57L1Q8IYX8 460 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 DNAJC19Q96DA6 116 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 RGS18Q9NS28 235 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 C1orf112Q9NSG2 853 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 PRMT7Q9NVM4 692 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-203ENST00000439080 ARHGAP28Q9P2N2 729 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 SERTAD1Q9UHV2 236 aa18.66■□□□□ 0.58
TARDBP-203ENST00000439080 CNTNAP2Q9UHC6 1331 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 SLC16A4O15374 487 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 B4GALT5O43286 388 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 PRKCBP05771 671 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 LIG1P18858 919 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 IBSPP21815 317 aaPredicted RBP18.65■□□□□ 0.58
TARDBP-203ENST00000439080 EFNA5P52803 228 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 MAPK6Q16659 721 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 TWF2Q6IBS0 349 aaKnown RBP18.65■□□□□ 0.58
TARDBP-203ENST00000439080 FAM117BQ6P1L5 589 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 PPP4R3CPQ6ZMV5 832 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 MYCT1Q8N699 235 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 TMEM87AQ8NBN3 555 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 SPIRE2Q8WWL2 714 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 PRIMPOLQ96LW4 560 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 LRRC27Q9C0I9 530 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 DACT1Q9NYF0 836 aa18.65■□□□□ 0.58
TARDBP-203ENST00000439080 RALGAPA2Q2PPJ7 1873 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.64■□□□□ 0.57
TARDBP-203ENST00000439080 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.64■□□□□ 0.57
TARDBP-203ENST00000439080 K7ENM7 598 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SOX1O00570 391 aaPredicted RBP18.64■□□□□ 0.57
TARDBP-203ENST00000439080 UPP2O95045 317 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 GJB5O95377 273 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 EDN1P05305 212 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SLFN14P0C7P3 912 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
TARDBP-203ENST00000439080 RABGGTBP53611 331 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SMTNP53814 917 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 NCKAP1LP55160 1127 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
TARDBP-203ENST00000439080 AMPD3Q01432 767 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 FAM187BQ17R55 369 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 SLC24A5Q71RS6 500 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 CPB2Q96IY4 423 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 TRIM9Q9C026 710 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms