RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RBM8AQ9Y5S9 174 aaKnown RBP4.71□□□□□ -1.66
HMGB3P12-201ENST00000438745 ADGRL1O94910 1474 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 DAPK3O43293 454 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 AKAP8O43823 692 aaKnown RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 PDE8AO60658 829 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 JUNP05412 331 aaKnown RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 PFKMP08237 780 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 MYCLP1P12525 358 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 HNRNPLP14866 589 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 ACRV1P26436 265 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 HSD3B2P26439 372 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 TCIRG1Q13488 830 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 MAN2A1Q16706 1144 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 USP39Q53GS9 565 aaKnown RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZBTB41Q5SVQ8 909 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 RNF207Q6ZRF8 634 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZNF662Q6ZS27 426 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 THNSL2Q86YJ6 484 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 LYSMD2Q8IV50 215 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 SLC41A1Q8IVJ1 513 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 IL17DQ8TAD2 202 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 RPL10LQ96L21 214 aaKnown RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 NOL10Q9BSC4 688 aaKnown RBP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 EMC7Q9NPA0 242 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 DNAI1Q9UI46 699 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZNF608Q9ULD9 1512 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 A0A1W2PRX2 142 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 PRSS38A1L453 326 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 TOX4O94842 621 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 SEC24DO94855 1032 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 FSBPO95073 299 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 APOL3O95236 402 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 GAAP10253 952 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 TACR2P21452 398 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 HIBADHP31937 336 aaKnown RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 GPR15P49685 360 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 SART3Q15020 963 aaKnown RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 EGFLAMQ63HQ2 1017 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 FAM111BQ6SJ93 734 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 FRMD7Q6ZUT3 714 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 RASSF3Q86WH2 238 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 D2HGDHQ8N465 521 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 LEO1Q8WVC0 666 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 HIST1H2AHQ96KK5 128 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 HIST1H2AJQ99878 128 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 ENKD1Q9H0I2 346 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 WNT8AQ9H1J5 351 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 VPS11Q9H270 941 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 TLR9Q9NR96 1032 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 AURKAIP1Q9NWT8 199 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 FANCD2Q9BXW9 1451 aa4.69□□□□□ -1.66
HMGB3P12-201ENST00000438745 UBE2QL1A1L167 161 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 LCHNA4D1U4 455 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZEB2O60315 1214 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 C6P13671 934 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 MANFP55145 182 aaKnown RBP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 CD69Q07108 199 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 CCDC178Q5BJE1 867 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 BROXQ5VW32 411 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 SGMS1Q86VZ5 419 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 CXorf67Q86X51 503 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 UNC5BQ8IZJ1 945 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 CMTM4Q8IZR5 234 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 THEMISQ8N1K5 641 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 CDYL2Q8N8U2 506 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 SLC16A11Q8NCK7 471 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 RSAD2Q8WXG1 361 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 TMEM176AQ96HP8 235 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 MS4A5Q9H3V2 200 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 C14orf93Q9H972 538 aaKnown RBP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 IL23AQ9NPF7 189 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 PCDHB6Q9Y5E3 794 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 GAPVD1Q14C86 1478 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZCCHC6Q5VYS8 1495 aaKnown RBP4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 KDM6BO15054 1643 aa4.68□□□□□ -1.66
HMGB3P12-201ENST00000438745 SBNO2Q9Y2G9 1366 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 CYP27B1O15528 508 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 FZD7O75084 574 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 PCDH8O95206 1070 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 IL2P60568 153 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 HHEXQ03014 270 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 HTR3DQ70Z44 454 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 DDX46Q7L014 1031 aaKnown RBP4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 TAS1R1Q7RTX1 841 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 C11orf74Q86VG3 221 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 TMPRSS6Q8IU80 811 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 C1orf210Q8IVY1 113 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 ANKRD35Q8N283 1001 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 PIK3C3Q8NEB9 887 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 GAB3Q8WWW8 586 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 SLC5A5Q92911 643 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 MIEF2Q96C03 454 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 TCF25Q9BQ70 676 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms