RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DNM3Q9UQ16 869 aa27.44■■□□□ 1.98
RAPGEF1-206ENST00000438647 FNDC1Q4ZHG4 1894 aaPredicted RBP27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 VWA3AA6NCI4 1184 aa27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 INO80B-WBP1J3KQ70 363 aa27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 AXLP30530 894 aa27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 LRRC43Q8N309 656 aa27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 PCDHB12Q9Y5F1 795 aa27.43■■□□□ 1.98
RAPGEF1-206ENST00000438647 PP2D1A8MPX8 630 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 ZNF623O75123 536 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 CSPP1Q1MSJ5 1256 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 KCTD17Q8N5Z5 321 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 ATXN2LQ8WWM7 1075 aaKnown RBP27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 AK8Q96MA6 479 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 CASD1Q96PB1 797 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 GPRC5CQ9NQ84 441 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 PRDM6Q9NQX0 595 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 RNF19AQ9NV58 838 aa27.42■■□□□ 1.98
RAPGEF1-206ENST00000438647 LRRIQ4A6NIV6 560 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 ATF7P17544 494 aaPredicted RBP27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 CDC25AP30304 524 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 PGBD4Q96DM1 585 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 CCDC51Q96ER9 411 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 MRPL9Q9BYD2 267 aaKnown RBP27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 NT5C3AQ9H0P0 336 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 FOXD4L1Q9NU39 408 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 TYW1Q9NV66 732 aaKnown RBP27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 COG5Q9UP83 839 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 PLAGL2Q9UPG8 496 aa27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 SPTBN5Q9NRC6 3674 aaKnown RBP27.41■■□□□ 1.98
RAPGEF1-206ENST00000438647 EYA4O95677 639 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 LAG3P18627 525 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 HOXA11P31270 313 aaPredicted RBP27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 MBTD1Q05BQ5 628 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 PPP2R5AQ15172 486 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 CLLU1OSQ5K130 101 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 NOTUMQ6P988 496 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 ZBTB8OSQ8IWT0 167 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 MMTAG2Q9BU76 263 aaKnown RBP27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 REV3LO60673 3130 aa27.4■■□□□ 1.98
RAPGEF1-206ENST00000438647 GRM6O15303 877 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 TSPAN1O60635 241 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 SF3A1Q15459 793 aaKnown RBP27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 KLHL23Q8NBE8 558 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 CNNM3Q8NE01 707 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 HELQQ8TDG4 1101 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 KIFAP3Q92845 792 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 CDK5RAP3Q96JB5 506 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 C2orf40Q9H1Z8 148 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 NSUN3Q9H649 340 aaKnown RBP27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 PCDHB2Q9Y5E7 798 aa27.39■■□□□ 1.98
RAPGEF1-206ENST00000438647 SLC26A4O43511 780 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 HSP90AA1P07900 732 aaKnown RBP27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 ZRSR1Q15695 479 aaKnown RBP27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 AAK1Q2M2I8 961 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 HYIQ5T013 277 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 GLB1LQ6UWU2 654 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 IFT74Q96LB3 600 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 CWH43Q9H720 699 aa27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 ALG13Q9NP73 1137 aaKnown RBP27.38■■□□□ 1.97
RAPGEF1-206ENST00000438647 KIAA1671Q9BY89 1806 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 E9PMD0 336 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 STX6O43752 255 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 ITGB1P05556 798 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 NAMPTP43490 491 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 MRPS5P82675 430 aaKnown RBP27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 RESTQ13127 1097 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 CDCA2Q69YH5 1023 aaPredicted RBP27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 COLGALT1Q8NBJ5 622 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 HLA-CQ95604 372 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 PRIMPOLQ96LW4 560 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 ZSCAN16Q9H4T2 348 aaPredicted RBP27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 PRMT7Q9NVM4 692 aaPredicted RBP27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 MTMR6Q9Y217 621 aa27.37■■□□□ 1.97
RAPGEF1-206ENST00000438647 UBE3AQ05086 875 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 MRPL10Q7Z7H8 261 aaKnown RBP27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 THNSL1Q8IYQ7 743 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 SPPL3Q8TCT6 385 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 LPPQ93052 612 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 XIRP2A4UGR9 3374 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 CNTNAP2Q9UHC6 1331 aa27.36■■□□□ 1.97
RAPGEF1-206ENST00000438647 CARNS1A5YM72 827 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 PDIA4P13667 645 aaKnown RBP27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 PPM1AP35813 382 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 LONP1P36776 959 aaKnown RBP27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 UBA7P41226 1012 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 AMHR2Q16671 573 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 TJAP1Q5JTD0 557 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 UBXN11Q5T124 520 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 PPP4R3CPQ6ZMV5 832 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 LRRC55Q6ZSA7 311 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 CABP7Q86V35 215 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 DEPTORQ8TB45 409 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 PPP2R3CQ969Q6 453 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 ZNF558Q96NG5 402 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 CSRNP2Q9H175 543 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 UBN1Q9NPG3 1134 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 HCSTQ9UBK5 93 aa27.35■■□□□ 1.97
RAPGEF1-206ENST00000438647 ARF4P18085 180 aaPredicted RBP27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 NCLP19338 710 aaKnown RBP27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 MAPK6Q16659 721 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms