RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 C5orf60A6NFR6 353 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 CHMP2AO43633 222 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 TRIM49P0CI25 452 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 TRIM49CP0CI26 452 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 HNRNPH1P31943 449 aaKnown RBP20.88■□□□□ 0.93
FAM239A-202ENST00000438107 CDR1P51861 262 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 KRT71Q3SY84 523 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 KSR1Q8IVT5 923 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 LMO3Q8TAP4 145 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 TLCD1Q96CP7 247 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 BCCIPQ9P287 314 aaKnown RBP eCLIP20.88■□□□□ 0.93
FAM239A-202ENST00000438107 RASAL2Q9UJF2 1139 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 NR2E1Q9Y466 385 aa20.88■□□□□ 0.93
FAM239A-202ENST00000438107 P4HA2O15460 535 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 CFBP00751 764 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 NUDT17P0C025 328 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 JAG1P78504 1218 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 SETQ01105 290 aaPredicted RBP20.87■□□□□ 0.93
FAM239A-202ENST00000438107 CEP55Q53EZ4 464 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 PHLDB3Q6NSJ2 640 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 HOOK3Q86VS8 718 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 NEK9Q8TD19 979 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 CEP89Q96ST8 783 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 PSMD1Q99460 953 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 ZDHHC18Q9NUE0 388 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 ZBTB39O15060 712 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 EXOC3O60645 756 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 KRT13P13646 458 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 VCAM1P19320 739 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 GBP1P32455 592 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 PRPF4BQ13523 1007 aaKnown RBP20.87■□□□□ 0.93
FAM239A-202ENST00000438107 FBXW10Q5XX13 1052 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 B3GNT9Q6UX72 402 aa20.87■□□□□ 0.93
FAM239A-202ENST00000438107 CNOT8Q9UFF9 292 aaKnown RBP20.87■□□□□ 0.93
FAM239A-202ENST00000438107 VIL1P09327 827 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 MAPTP10636 758 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 GTF2A1P52655 376 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 MAGOHP61326 146 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 IFFO1Q0D2I5 559 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ALCAMQ13740 583 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ARHGAP44Q17R89 818 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 INTS8Q75QN2 995 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 MAGOHBQ96A72 148 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 CENPTQ96BT3 561 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 VCPKMTQ9H867 229 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ARHGEF10LQ9HCE6 1279 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 TAS2R14Q9NYV8 317 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 COG5Q9UP83 839 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 H0YHG0 523 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 FOXN3O00409 490 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ACTN3Q08043 901 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 CETN1Q12798 172 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 KIAA1755Q5JYT7 1200 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 SWT1Q5T5J6 900 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 COL23A1Q86Y22 540 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 SYCP3Q8IZU3 236 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 UBL4BQ8N7F7 174 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ZNF577Q9BSK1 485 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 TEKT3Q9BXF9 490 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 UNC45AQ9H3U1 944 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ACTR5Q9H9F9 607 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 SEPT11Q9NVA2 429 aaKnown RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 WRAP73Q9P2S5 460 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-202ENST00000438107 ATP8A1Q9Y2Q0 1164 aa20.86■□□□□ 0.93
FAM239A-202ENST00000438107 PHF2O75151 1096 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 GGPS1O95749 300 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 MAPK7Q13164 816 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 JAMLQ86YT9 394 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 C12orf56Q8IXR9 622 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 MORC4Q8TE76 937 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 RPS6KC1Q96S38 1066 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 RANBP17Q9H2T7 1088 aaKnown RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 TMEM206Q9H813 350 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 ERVK-5Q9HDB9 667 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 MRPL11Q9Y3B7 192 aaKnown RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 ALG6Q9Y672 507 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 ARHGEF35A5YM69 484 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 ECE2O60344 883 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 TMOD1P28289 359 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 CHRNA3P32297 505 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 IFT88Q13099 833 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 RNF187Q5TA31 235 aaPredicted RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 KCNV1Q6PIU1 500 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 CROCCP2Q86T23 111 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 RAPGEF5Q92565 580 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 ALG3Q92685 438 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 CABS1Q96KC9 395 aa20.85■□□□□ 0.93
FAM239A-202ENST00000438107 PABPC3Q9H361 631 aaKnown RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 DDX20Q9UHI6 824 aaKnown RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
FAM239A-202ENST00000438107 HIP1RO75146 1068 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 BYSLQ13895 437 aaKnown RBP20.84■□□□□ 0.93
FAM239A-202ENST00000438107 RRP1BQ14684 758 aaKnown RBP20.84■□□□□ 0.93
FAM239A-202ENST00000438107 PALB2Q86YC2 1186 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 SPICE1Q8N0Z3 855 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 RIT2Q99578 217 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 LXNQ9BS40 222 aa20.84■□□□□ 0.93
FAM239A-202ENST00000438107 TRIM31Q9BZY9 425 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms