RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 STAM2O75886 525 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SEZ6Q53EL9 994 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SPIRE2Q8WWL2 714 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 HAS1Q92839 578 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 HSPBP1Q9NZL4 362 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 GAS8O95995 478 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 YWHABP31946 246 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 RINT1Q6NUQ1 792 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 RSAD2Q8WXG1 361 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 ARHGEF2Q92974 986 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 SGPL1O95470 568 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 ATP11AP98196 1134 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF408Q9H9D4 720 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 CHN1P15882 459 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 ACP6Q9NPH0 428 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 LSP1P33241 339 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 SALL4Q9UJQ4 1053 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 EML1O00423 815 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 MAP2K2P36507 400 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
PDLIM5-206ENST00000437932 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.4
PDLIM5-206ENST00000437932 TFAMQ00059 246 aaKnown RBP12.52□□□□□ -0.4
PDLIM5-206ENST00000437932 CTAGE3PQ8IX95 158 aa12.52□□□□□ -0.4
PDLIM5-206ENST00000437932 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.4
PDLIM5-206ENST00000437932 HSPH1Q92598 858 aa12.52□□□□□ -0.4
PDLIM5-206ENST00000437932 NPEPPSP55786 919 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 BFSP1Q12934 665 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 CERS5Q8N5B7 392 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 RFFLQ8WZ73 363 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 EPN3Q9H201 632 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 CCND2P30279 289 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 RWDD2BP57060 319 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 RHBDL3P58872 404 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 AMPD2Q01433 879 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 MEA1Q16626 185 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 MEI1Q5TIA1 1274 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 RFX6Q8HWS3 928 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 TAS2R14Q9NYV8 317 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 A6NNZ2 444 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 PLS3P13797 630 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 ACOT2P49753 483 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 NUGGCQ68CJ6 796 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 SESTD1Q86VW0 696 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
PDLIM5-206ENST00000437932 IL1R1P14778 569 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 KRT17Q04695 432 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 CDO1Q16878 200 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 HIBCHQ6NVY1 386 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 FAM84AQ96KN4 292 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 COMTP21964 271 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 MTMR2Q13614 643 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 TRIM7Q9C029 511 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 GRK7Q8WTQ7 553 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 RPA1P27694 616 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 DLG4P78352 724 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 RASA3Q14644 834 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 EPS8L3Q8TE67 593 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-206ENST00000437932 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms