RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 DCTN3O75935 186 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 VPS72Q15906 364 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 KCND2Q9NZV8 630 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 DIP2BQ9P265 1576 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 C19orf81C9J6K1 198 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 MAPK13O15264 365 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 KRT38O76015 456 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 AP1M1Q9BXS5 423 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 ZNRF3Q9ULT6 936 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 POTECB2RU33 542 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 NMT2O60551 498 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 RALAP11233 206 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 FGD4Q96M96 766 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 M0QYV0 167 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 LARGE1O95461 756 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 SDC4P31431 198 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 TTC8Q8TAM2 541 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 STXBP3O00186 592 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 IFNA8P32881 189 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 IL1RL1Q01638 556 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 EFHC2Q5JST6 749 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 SP110Q9HB58 689 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 CD2BP2O95400 341 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 MAML1Q92585 1016 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 MRPL40Q9NQ50 206 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 PARVAQ9NVD7 372 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 PCDHA10Q9Y5I2 948 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 POTEFA5A3E0 1075 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 MX2P20592 715 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 DEUP1Q05D60 604 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 SPP2Q13103 211 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 VEPH1Q14D04 833 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 OR6J1Q8NGC5 347 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 UBE2Q2Q8WVN8 375 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 KPNA7A9QM74 516 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 PRCPP42785 496 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 GCLMP48507 274 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 NRBF2Q96F24 287 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 DDX5P17844 614 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
PTPN13-204ENST00000436978 ZNF564Q8TBZ8 553 aaPredicted RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 FNDC3AQ9Y2H6 1198 aaKnown RBP16.9■□□□□ 0.3
PTPN13-204ENST00000436978 ASAP2O43150 1006 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 IFT88Q13099 833 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 SNAPC2Q13487 334 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 KIF19Q2TAC6 998 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PASD1Q8IV76 773 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 SUCLA2Q9P2R7 463 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 NCF2P19878 526 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 NNTQ13423 1086 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PIDD1Q9HB75 910 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 SUN2Q9UH99 717 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PACSIN2Q9UNF0 486 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 FIS1Q9Y3D6 152 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 AP3B1O00203 1094 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 APOEP02649 317 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 NR1D1P20393 614 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 ATP2C1P98194 919 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 ADAMTS1Q9UHI8 967 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 OCRLQ01968 901 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 FSCBQ5H9T9 825 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 RUBCNQ92622 972 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 ZNF512BQ96KM6 892 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 TRAIPQ9BWF2 469 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PDS5AQ29RF7 1337 aaKnown RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 MTMR2Q13614 643 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 PARK7Q99497 189 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms