RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 CCDC197Q8NCU1 140 aa17.23■□□□□ 0.35
C9orf172-201ENST00000436881 NCK2O43639 380 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 CRCPO75575 148 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 DGAT1O75907 488 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 MTMR2Q13614 643 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 KCTD6Q8NC69 237 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 MORC4Q8TE76 937 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 RBM41Q96IZ5 413 aaKnown RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■□□□ 11.8
C9orf172-201ENST00000436881 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 SNX24Q9Y343 169 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 TFRCP02786 760 aaKnown RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 TNFAIP2Q03169 654 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 BAATQ14032 418 aaPredicted RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 ZNF568Q3ZCX4 644 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 RBM46Q8TBY0 533 aaKnown RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 PPP4R1Q8TF05 950 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 JPH1Q9HDC5 661 aaPredicted RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 UCHL3P15374 230 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 COPB2P35606 906 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
C9orf172-201ENST00000436881 PDCLQ13371 301 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 ANKZF1Q9H8Y5 726 aa17.22■□□□□ 0.35
C9orf172-201ENST00000436881 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ZNF185O15231 689 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 TJP3O95049 919 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 PKN1Q16512 942 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ZNF564Q8TBZ8 553 aaPredicted RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 INTS13Q9NVM9 706 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 SEPT10Q9P0V9 454 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 CALB1P05937 261 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 TTLL4Q14679 1199 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ZNF699Q32M78 642 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 LCMT1Q9UIC8 334 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 SLCO1A2P46721 670 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ADCY2Q08462 1091 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 NFIAQ12857 509 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 ARMCX2Q7L311 632 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 MRPL4Q9BYD3 311 aaKnown RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 STK33Q9BYT3 514 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
C9orf172-201ENST00000436881 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.35
C9orf172-201ENST00000436881 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.34
C9orf172-201ENST00000436881 NR3C2P08235 984 aa17.21■□□□□ 0.34
C9orf172-201ENST00000436881 ERVK-24P63145 666 aa17.21■□□□□ 0.34
C9orf172-201ENST00000436881 NCAPGQ9BPX3 1015 aa17.21■□□□□ 0.34
C9orf172-201ENST00000436881 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.34
C9orf172-201ENST00000436881 DDX47Q9H0S4 455 aaKnown RBP17.21■□□□□ 0.34
C9orf172-201ENST00000436881 A0A1W2PQJ5 194 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 PSMD14O00487 310 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 PSMA2P25787 234 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 DARS2Q6PI48 645 aaKnown RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 TRIM72Q6ZMU5 477 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 STRIP2Q9ULQ0 834 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 TARSL2A2RTX5 802 aaKnown RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 IFT88Q13099 833 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 C3orf67Q6ZVT6 689 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 SLITRK6Q9H5Y7 841 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 RBAKQ9NYW8 714 aaPredicted RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 IL1R1P14778 569 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 BMP6P22004 513 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 FMO5P49326 533 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 Q3C1V9 767 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 NGRNQ9NPE2 291 aaKnown RBP17.2■□□□□ 0.34
C9orf172-201ENST00000436881 C3P01024 1663 aa17.2■□□□□ 0.34
C9orf172-201ENST00000436881 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
C9orf172-201ENST00000436881 MSH2P43246 934 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 MYCBPQ99417 103 aaPredicted RBP17.19■□□□□ 0.34
C9orf172-201ENST00000436881 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 PLAAQ9Y263 795 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 EXOC1LA0A1B0GW35 172 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 PCK1P35558 622 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 EFNA5P52803 228 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 PDE1BQ01064 536 aa17.19■□□□□ 0.34
C9orf172-201ENST00000436881 NUP85Q9BW27 656 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms