RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 DBR1Q9UK59 544 aaKnown RBP15.3■□□□□ 0.04
LINC00028-201ENST00000435497 DENND4AQ7Z401 1863 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 PRR23AA6NEV1 266 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 LILRB3O75022 631 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 MAFO75444 373 aaPredicted RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 SLC11A1P49279 550 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 AFF1P51825 1210 aaKnown RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 PTPN14Q15678 1187 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 Q4G0T1 1027 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 TWF2Q6IBS0 349 aaKnown RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 MIER3Q7Z3K6 550 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 GPR149Q86SP6 731 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 FBXL16Q8N461 479 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 RDM1Q8NG50 284 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 RNF26Q9BY78 433 aaPredicted RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 CYP26B1Q9NR63 512 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 SUCLA2Q9P2R7 463 aaPredicted RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 SEPT9Q9UHD8 586 aaPredicted RBP15.29■□□□□ 0.04
LINC00028-201ENST00000435497 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 C2orf16Q68DN1 1984 aa15.29■□□□□ 0.04
LINC00028-201ENST00000435497 CYP3A7-CYP3A51PA0A087WV96 503 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 PI15O43692 258 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 DDHD2O94830 711 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 IFNAR1P17181 557 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 NPR3P17342 541 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 SFPQP23246 707 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 CYP3A7P24462 503 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 CLCN5P51795 746 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 GIT2Q14161 759 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 CWF19L1Q69YN2 538 aaKnown RBP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 AGMOQ6ZNB7 445 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 CABP7Q86V35 215 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 ZNF410Q86VK4 478 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 RHPN2Q8IUC4 686 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 CCDC148Q8NFR7 591 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 RSPH1Q8WYR4 309 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 JAKMIP1Q96N16 626 aaKnown RBP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 KLHL5Q96PQ7 755 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 IFT122Q9HBG6 1241 aa15.28■□□□□ 0.04
LINC00028-201ENST00000435497 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 PIN4Q9Y237 131 aaKnown RBP15.28■□□□□ 0.04
LINC00028-201ENST00000435497 DDX11L8A8MPP1 907 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 M0R2N6 131 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 TDP2O95551 362 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 SKIP12755 728 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 DNM2P50570 870 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 CLCN4P51793 760 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.04
LINC00028-201ENST00000435497 ANO5Q75V66 913 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 CATSPER4Q7RTX7 472 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
LINC00028-201ENST00000435497 TMEM87AQ8NBN3 555 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 MBOAT7Q96N66 472 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 INO80BQ9C086 356 aaPredicted RBP15.27■□□□□ 0.04
LINC00028-201ENST00000435497 SH3GLB2Q9NR46 395 aa15.27■□□□□ 0.04
LINC00028-201ENST00000435497 DCHS1Q96JQ0 3298 aa15.27■□□□□ 0.03
LINC00028-201ENST00000435497 EP300Q09472 2414 aaPredicted RBP15.27■□□□□ 0.03
LINC00028-201ENST00000435497 WDR87Q6ZQQ6 2873 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 CARNS1A5YM72 827 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 EML1O00423 815 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 CDC45O75419 566 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 CNPP09543 421 aaKnown RBP15.26■□□□□ 0.03
LINC00028-201ENST00000435497 RPS6KB1P23443 525 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
LINC00028-201ENST00000435497 HSPA4P34932 840 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 EVCP57679 992 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 NLRP5P59047 1200 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 RNASELQ05823 741 aaKnown RBP15.26■□□□□ 0.03
LINC00028-201ENST00000435497 BLOC1S2Q6QNY1 142 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 FRMD5Q7Z6J6 570 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 PPFIBP1Q86W92 1011 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
LINC00028-201ENST00000435497 MFSD1Q9H3U5 465 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 MINDY3Q9H8M7 445 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
LINC00028-201ENST00000435497 SSBP05455 408 aaKnown RBP eCLIP15.25■□□□□ 0.03
LINC00028-201ENST00000435497 KLRC2P26717 231 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
LINC00028-201ENST00000435497 RAB27AP51159 221 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 NPEPPSP55786 919 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 TDGQ13569 410 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 NPY5RQ15761 445 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 UBXN11Q5T124 520 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 PLA2G4FQ68DD2 849 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 FLCNQ8NFG4 579 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
LINC00028-201ENST00000435497 PGBD4Q96DM1 585 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 NLRP4Q96MN2 994 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 SFXN1Q9H9B4 322 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms