RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 KRT17Q04695 432 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
LINC01006-204ENST00000435354 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 CATSPER4Q7RTX7 472 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 SLFN12Q8IYM2 578 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 PSPC1Q8WXF1 523 aaKnown RBP16.06■□□□□ 0.16
LINC01006-204ENST00000435354 MRPL9Q9BYD2 267 aaKnown RBP16.06■□□□□ 0.16
LINC01006-204ENST00000435354 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 FAM105AQ9NUU6 356 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 MUTYHQ9UIF7 546 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 HCN4Q9Y3Q4 1203 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 PPME1Q9Y570 386 aa16.06■□□□□ 0.16
LINC01006-204ENST00000435354 MUC6Q6W4X9 2439 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 ZNF623O75123 536 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 SRGAP2CP0DJJ0 459 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 FOSBP53539 338 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 EMC2Q15006 297 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-204ENST00000435354 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-204ENST00000435354 SUSD6Q92537 303 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 ZSWIM4Q9H7M6 989 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 BRMS1Q9HCU9 246 aa16.05■□□□□ 0.16
LINC01006-204ENST00000435354 NGRNQ9NPE2 291 aaKnown RBP16.05■□□□□ 0.16
LINC01006-204ENST00000435354 ARIH1Q9Y4X5 557 aaPredicted RBP16.05■□□□□ 0.16
LINC01006-204ENST00000435354 TRIOO75962 3097 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 B4GALT3O60512 393 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 OFD1O75665 1012 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 SLITRK3O94933 977 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 SKIP12755 728 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 HOXA11P31270 313 aaPredicted RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 RAB27AP51159 221 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 XKR9Q5GH70 373 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 UBXN11Q5T124 520 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 ANKRD54Q6NXT1 300 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 SYCE2Q6PIF2 218 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 GLB1LQ6UWU2 654 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 TMC7Q7Z402 723 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 FERMT3Q86UX7 667 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 DIS3L2Q8IYB7 885 aaKnown RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 EXOC8Q8IYI6 725 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 BCL7CQ8WUZ0 217 aaPredicted RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 HSD17B14Q9BPX1 270 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 EIF2AK1Q9BQI3 630 aaKnown RBP16.04■□□□□ 0.16
LINC01006-204ENST00000435354 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 XPNPEP1Q9NQW7 623 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
LINC01006-204ENST00000435354 GAS2O43903 313 aaKnown RBP16.03■□□□□ 0.16
LINC01006-204ENST00000435354 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC01006-204ENST00000435354 LYPLA2O95372 231 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 TECP42680 631 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
LINC01006-204ENST00000435354 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
LINC01006-204ENST00000435354 CALCRLQ16602 461 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 OTUD6AQ7L8S5 288 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 SRGAP1Q7Z6B7 1085 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 MTMR9Q96QG7 549 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
LINC01006-204ENST00000435354 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 PCDHA12Q9UN75 941 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 ZNF318Q5VUA4 2279 aa16.03■□□□□ 0.16
LINC01006-204ENST00000435354 NEMFO60524 1076 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 GALTP07902 379 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.16
LINC01006-204ENST00000435354 MRPL10Q7Z7H8 261 aaKnown RBP16.02■□□□□ 0.16
LINC01006-204ENST00000435354 RNF149Q8NC42 400 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 TCP11Q8WWU5 503 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 TMEM169Q96HH4 297 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 MTRQ99707 1265 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 APOL5Q9BWW9 433 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 VN1R3Q9BXE9 311 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.16
LINC01006-204ENST00000435354 DNAJB4Q9UDY4 337 aa16.02■□□□□ 0.16
LINC01006-204ENST00000435354 ASAP2O43150 1006 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
LINC01006-204ENST00000435354 SRGAP2BP0DMP2 458 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 TXKP42681 527 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 SLC11A1P49279 550 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 TRIM29Q14134 588 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 HFE2Q6ZVN8 426 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 ZNF280BQ86YH2 543 aa16.01■□□□□ 0.15
LINC01006-204ENST00000435354 VPS52Q8N1B4 723 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms