RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CHKAP35790 457 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 MRPL12P52815 198 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 EPHA7Q15375 998 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 PARP10Q53GL7 1025 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 CYP4X1Q8N118 509 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 SLC12A4Q9UP95 1085 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 DUPD1Q68J44 220 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 LLGL2Q6P1M3 1020 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 NR3C1P04150 777 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 ABL2P42684 1182 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 DRP2Q13474 957 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PIGWQ7Z7B1 504 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PRELID2Q8N945 189 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 DNAJC12Q9UKB3 198 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 CCDC160A6NGH7 325 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 SSTR3P32745 418 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 MMP13P45452 471 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 TUBP50607 506 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 MGAT5Q09328 741 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 CNGA2Q16280 664 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 GALNT17Q6IS24 598 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 CCDC105Q8IYK2 499 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PROM2Q8N271 834 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 RAB34Q9BZG1 259 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 CTTNBP2NLQ9P2B4 639 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 RASGRF2O14827 1237 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PAEPP09466 180 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 SLC8A1P32418 973 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 PPP1R2P41236 205 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 CACNB3P54284 484 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 GIT2Q14161 759 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 TXLNGYQ9BZA5 131 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 DHX36Q9H2U1 1008 aaKnown RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 SUCLA2Q9P2R7 463 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-203ENST00000434667 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
SCAF4-203ENST00000434667 SPAG7O75391 227 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 PYGMP11217 842 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 EPC2Q52LR7 807 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 ZNF449Q6P9G9 518 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 PSTPIP2Q9H939 334 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 FAM114A2Q9NRY5 505 aa11.27□□□□□ -0.6
SCAF4-203ENST00000434667 FOXN3O00409 490 aaPredicted RBP11.27□□□□□ -0.61
SCAF4-203ENST00000434667 SNX3O60493 162 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 AP1G2O75843 785 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 CETPP11597 493 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 CRYMQ14894 314 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 KYNUQ16719 465 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 KNOP1Q1ED39 458 aaKnown RBP11.27□□□□□ -0.61
SCAF4-203ENST00000434667 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
SCAF4-203ENST00000434667 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 IQCDQ96DY2 449 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
SCAF4-203ENST00000434667 ASTN1O14525 1302 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 PFASO15067 1338 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 SNED1Q8TER0 1413 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 CCDC188H7C350 402 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 PTENP60484 403 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 DLG4P78352 724 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 COBLL1Q53SF7 1204 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 ANKLE1Q8NAG6 615 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 ARHGEF2Q92974 986 aaKnown RBP11.27□□□□□ -0.61
SCAF4-203ENST00000434667 CEP63Q96MT8 703 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 SWAP70Q9UH65 585 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 INTUQ9ULD6 942 aa11.27□□□□□ -0.61
SCAF4-203ENST00000434667 STAT1P42224 750 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 MAPK7Q13164 816 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 ARMC3Q5W041 872 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 HOOK3Q86VS8 718 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 LINC00116Q8NCU8 138 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 HOOK2Q96ED9 719 aa11.26□□□□□ -0.61
SCAF4-203ENST00000434667 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms