RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CRISPLD1Q9H336 500 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 MED4Q9NPJ6 270 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 TYW1Q9NV66 732 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 HDAC9Q9UKV0 1011 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 VAV3Q9UKW4 847 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 GUCA1BQ9UMX6 200 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 SNX12Q9UMY4 172 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 KIAA1024Q9UPX6 916 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 HYOU1Q9Y4L1 999 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 PCDHA13Q9Y5I0 950 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 IGLV3-22A0A075B6J6 115 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 A0A0U1RQJ8 604 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L13C9JLJ4 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L11C9JVI0 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L18D6R9N7 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L22D6RA61 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L17D6RBQ6 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L19D6RCP7 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L20D6RJB6 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 OPLAHO14841 1288 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ZNF263O14978 683 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 CALUO43852 315 aaPredicted RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 MED24O75448 989 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 VIL1P09327 827 aaKnown RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 SPATA31C1P0DKV0 1188 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 AARSP49588 968 aaKnown RBP eCLIP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ZNF131P52739 623 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L24Q0WX57 530 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ALCAMQ13740 583 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 GIT2Q14161 759 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 SMC1AQ14683 1233 aaKnown RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ARSHQ5FYA8 562 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 HERC4Q5GLZ8 1057 aaPredicted RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 HGSNATQ68CP4 663 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L6PQ6QN14 398 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 B3GNT9Q6UX72 402 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 STXBP4Q6ZWJ1 553 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 CACNA2D4Q7Z3S7 1137 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 CATSPER3Q86XQ3 398 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ZFPM1Q8IX07 1006 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 RTKN2Q8IZC4 609 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 EXOC4Q96A65 974 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 GANQ9H2C0 597 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 RANBP17Q9H2T7 1088 aaKnown RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 INTUQ9ULD6 942 aa8.15□□□□□ -1.1
COL17A1-204ENST00000433822 MRPL11Q9Y3B7 192 aaKnown RBP8.15□□□□□ -1.1
COL17A1-204ENST00000433822 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
COL17A1-204ENST00000433822 CUL9Q8IWT3 2517 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 THSD7BQ9C0I4 1608 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 FRMPD4Q14CM0 1322 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 A0A0A6YYK5 440 aaPredicted RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 A0A0U1RQG5 324 aaPredicted RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 CCDC66A2RUB6 948 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 GRID2IPA4D2P6 1211 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 E9PMD0 336 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 MSH4O15457 936 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 AKR1B10O60218 316 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 PSMD10O75832 226 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 SASH3O75995 380 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 NOL4O94818 638 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 ABL1P00519 1130 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 GH2P01242 217 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 ATP1A1P05023 1023 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 RFX1P22670 979 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 CYP2C19P33261 490 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 EIF4A3P38919 411 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 MAGEA1P43355 309 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 CHRNA4P43681 627 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 SNRPFP62306 86 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 ATP2B2Q01814 1243 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 SLC18A3Q16572 532 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 IFI16Q16666 785 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 FAM83BQ5T0W9 1011 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 SFMBT2Q5VUG0 894 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 RRAGAQ7L523 313 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 AGBL3Q8NEM8 1001 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 GOLGA5Q8TBA6 731 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 FAM71BQ8TC56 605 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 SLC5A5Q92911 643 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 CALR3Q96L12 384 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 NOX5Q96PH1 765 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 PNKPQ96T60 521 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 RIT2Q99578 217 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 HSD17B14Q9BPX1 270 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 TIPINQ9BVW5 301 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms