RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 UNC45AQ9H3U1 944 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 MAP3K20Q9NYL2 800 aaKnown RBP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 RASAL2Q9UJF2 1139 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 PCDHAC2Q9Y5I4 1007 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 MEFVO15553 781 aaPredicted RBP14.79□□□□□ -0.04
COL6A3-207ENST00000433762 NUDT17P0C025 328 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 GZMAP12544 262 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 HSD17B4P51659 736 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 JAG1P78504 1218 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 TNIP1Q15025 636 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 TRADDQ15628 312 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 ZC2HC1CQ53FD0 456 aaPredicted RBP14.79□□□□□ -0.04
COL6A3-207ENST00000433762 DUPD1Q68J44 220 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 FAM151AQ8WW52 585 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 CNKSR1Q969H4 720 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 MXRA8Q9BRK3 442 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 LXNQ9BS40 222 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 PLEKHA4Q9H4M7 779 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 TDRD3Q9H7E2 651 aaKnown RBP14.79□□□□□ -0.04
COL6A3-207ENST00000433762 VCPKMTQ9H867 229 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 AMACRQ9UHK6 382 aa14.79□□□□□ -0.04
COL6A3-207ENST00000433762 EXOC3O60645 756 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 KIAA0754O94854 1291 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 FSBPO95073 299 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 FGGP02679 453 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 MMP10P09238 476 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 INPP5BP32019 993 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 NLRP14Q86W24 1093 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
COL6A3-207ENST00000433762 UBL4BQ8N7F7 174 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 MYCBPAPQ8TBZ2 947 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 CENPTQ96BT3 561 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 GOLPH3Q9H4A6 298 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 PARP2Q9UGN5 583 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 SFI1A8K8P3 1242 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 H0YIN7 160 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 POLD1P28340 1107 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 ATP1A2P50993 1020 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
COL6A3-207ENST00000433762 HOOK3Q86VS8 718 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 ZNF473Q8WTR7 871 aaKnown RBP14.78□□□□□ -0.04
COL6A3-207ENST00000433762 HVCN1Q96D96 273 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 ACCSQ96QU6 501 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 FMO2Q99518 471 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 ERP44Q9BS26 406 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 NEUROG2Q9H2A3 272 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 ZBTB21Q9ULJ3 1066 aa14.78□□□□□ -0.04
COL6A3-207ENST00000433762 MYO1FO00160 1098 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 IPO5O00410 1097 aaKnown RBP14.77□□□□□ -0.04
COL6A3-207ENST00000433762 TTI1O43156 1089 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 DAPK3O43293 454 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 HIP1RO75146 1068 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 P4HBP07237 508 aaKnown RBP14.77□□□□□ -0.04
COL6A3-207ENST00000433762 ITGA4P13612 1032 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 CHRNA3P32297 505 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 PPP2R2AP63151 447 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 DCAF12L1Q5VU92 463 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 PACS2Q86VP3 889 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 SYCP3Q8IZU3 236 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 DAW1Q8N136 415 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 OSGEPQ9NPF4 335 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 PCYOX1Q9UHG3 505 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.04
COL6A3-207ENST00000433762 C5orf60A6NFR6 353 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 PODXLO00592 558 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 VCAM1P19320 739 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 CYP2J2P51589 502 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 DR1Q01658 176 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 GUCY1A3Q02108 690 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 COG2Q14746 738 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 PHLDB3Q6NSJ2 640 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 P3H4Q92791 437 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 ZNF622Q969S3 477 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL6A3-207ENST00000433762 CCT8L2Q96SF2 557 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 WNT8AQ9H1J5 351 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 PNMA2Q9UL42 364 aa14.77□□□□□ -0.05
COL6A3-207ENST00000433762 PHF2O75151 1096 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 RTN2O75298 545 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 VAMP7P51809 220 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-207ENST00000433762 TMEM109Q9BVC6 243 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 ZDHHC18Q9NUE0 388 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 WRAP73Q9P2S5 460 aaPredicted RBP14.76□□□□□ -0.05
COL6A3-207ENST00000433762 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
COL6A3-207ENST00000433762 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 TRAPPC3O43617 180 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 CHMP2AO43633 222 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 PLS3P13797 630 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 USP8P40818 1118 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 GPC5P78333 572 aa14.76□□□□□ -0.05
COL6A3-207ENST00000433762 GTF2BQ00403 316 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms