RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 BECN1Q14457 450 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 STK38Q15208 465 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 PAN2Q504Q3 1202 aaKnown RBP20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 ECHDC2Q86YB7 292 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 ARNTL2Q8WYA1 636 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 ZNF396Q96N95 335 aaPredicted RBP20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 INO80BQ9C086 356 aaPredicted RBP20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 CCSER1Q9C0I3 900 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 HCSTQ9UBK5 93 aa20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
RPUSD3-207ENST00000433555 INO80B-WBP1J3KQ70 363 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 B4GALT5O43286 388 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 SLC26A4O43511 780 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 HIP1RO75146 1068 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 SSBP05455 408 aaKnown RBP eCLIP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 PLA2G4BP0C869 781 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 ZSCAN20P17040 1043 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 HOXA11P31270 313 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 ERVK-21P61565 698 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 DNM1Q05193 864 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 POU5F1BQ06416 359 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 UBXN11Q5T124 520 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 ZNF598Q86UK7 904 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 SYT2Q8N9I0 419 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 KRI1Q8N9T8 703 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 GDPD5Q8WTR4 605 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 NFKBIZQ9BYH8 718 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 TMEM161AQ9NX61 479 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 LRFN2Q9ULH4 789 aa20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 MRPL42Q9Y6G3 142 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-207ENST00000433555 A0A087X0B3 334 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 NPHP3-ACAD11A0A0J9YXS1 232 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 MEIS3P2A8K0S8 358 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 SPTLC2O15270 562 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 YEATS4O95619 227 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 STAG3L1P0CL83 205 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 PDIA4P13667 645 aaKnown RBP20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 RAD51AP2Q09MP3 1159 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 RAD54LQ92698 747 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 CALML4Q96GE6 196 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 CPB2Q96IY4 423 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 TGS1Q96RS0 853 aaKnown RBP20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 CCDC113Q9H0I3 377 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 CHST12Q9NRB3 414 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 STXBP5LQ9Y2K9 1186 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 PCDHB7Q9Y5E2 793 aa20.94■□□□□ 0.94
RPUSD3-207ENST00000433555 TTLL13PA6NNM8 815 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 LPXNO60711 386 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 FOSL2P15408 326 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 GUCY2CP25092 1073 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 NAMPTP43490 491 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 BTG3Q14201 252 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 MCM6Q14566 821 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 ARSHQ5FYA8 562 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 CLLU1OSQ5K130 101 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 TWF2Q6IBS0 349 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 FAM43BQ6ZT52 329 aaPredicted RBP20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 CMTR2Q8IYT2 770 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 RNF169Q8NCN4 708 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 LPPQ93052 612 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 ELAC1Q9H777 363 aaKnown RBP20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 FAM105AQ9NUU6 356 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 USP20Q9Y2K6 914 aa20.93■□□□□ 0.94
RPUSD3-207ENST00000433555 EYSQ5T1H1 3165 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 A0A0U1RQF3 1178 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 PPP6R2O75170 966 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 ERLIN2O94905 339 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 ARF4P18085 180 aaPredicted RBP20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 LONRF3Q496Y0 759 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 NAALADL2Q58DX5 795 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 CDR2LQ86X02 465 aaPredicted RBP20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 FIBCD1Q8N539 461 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 KCTD17Q8N5Z5 321 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 RASSF8Q8NHQ8 419 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 KIFAP3Q92845 792 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 TRAIPQ9BWF2 469 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 EIF2AQ9BY44 585 aaKnown RBP20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 DACT1Q9NYF0 836 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 TRANK1O15050 2925 aa20.92■□□□□ 0.94
RPUSD3-207ENST00000433555 TBKBP1A7MCY6 615 aa20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 DDIT3P35638 169 aa20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 DHX8Q14562 1220 aaKnown RBP20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 GPBP1Q86WP2 473 aa20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 DEPTORQ8TB45 409 aa20.91■□□□□ 0.94
RPUSD3-207ENST00000433555 TDRD15B5MCY1 1934 aaKnown RBP20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 CNTNAP2Q9UHC6 1331 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 SFI1A8K8P3 1242 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 CTNNB1P35222 781 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 PEX3P56589 373 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 EPC2Q52LR7 807 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 AXDND1Q5T1B0 1012 aaPredicted RBP20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 SHC4Q6S5L8 630 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 ZBTB8OSQ8IWT0 167 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 TMEM192Q8IY95 271 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 HELQQ8TDG4 1101 aa20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 LARP4BQ92615 738 aaKnown RBP20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 CLP1Q92989 425 aaKnown RBP20.9■□□□□ 0.94
RPUSD3-207ENST00000433555 CASD1Q96PB1 797 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms