RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 KIAA1683Q9H0B3 1180 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TAF1DQ9H5J8 278 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SYNCQ9H7C4 482 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 EMILIN3Q9NT22 766 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 PCDHA10Q9Y5I2 948 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SPOPO43791 374 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 NUDT17P0C025 328 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 GNAT1P11488 350 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC130P13994 396 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CTNNA1P35221 906 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 HSPA13P48723 471 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 VCX3AQ9NNX9 186 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 STAP1Q9ULZ2 295 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 STK38LQ9Y2H1 464 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 JAK2O60674 1132 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SOX5P35711 763 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 QARSP47897 775 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 RINT1Q6NUQ1 792 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 PDXDC1Q6P996 788 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ATP6V1G3Q96LB4 118 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CAPS2Q9BXY5 557 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 IRX2Q9BZI1 471 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MROH8Q9H579 483 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CTTNBP2NLQ9P2B4 639 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 DAGLAQ9Y4D2 1042 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CSADQ9Y600 493 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MAPK9P45984 424 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 GCLCP48506 637 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FOXD4L5Q5VV16 416 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ZC3H3Q8IXZ2 948 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ATP11CQ8NB49 1132 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TMEM35BQ8NCS4 154 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FOXD4L4Q8WXT5 416 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 OLFM3Q96PB7 478 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 JPH1Q9HDC5 661 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 PANK4Q9NVE7 773 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 NRXN2Q9P2S2 1712 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 RIF1Q5UIP0 2472 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 CAND2O75155 1236 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TJP3O95049 919 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 LIG1P18858 919 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 FXR1P51114 621 aaKnown RBP eCLIP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PRKAA2P54646 552 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 HSPA2P54652 639 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 GPSM2P81274 684 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PNOCQ13519 176 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 POTEAQ6S8J7 498 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TADA2BQ86TJ2 420 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 C16orf71Q8IYS4 520 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PPFIBP2Q8ND30 876 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DTNBP1Q96EV8 351 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MS4A14Q96JA4 679 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 CD209Q9NNX6 404 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 APEX2Q9UBZ4 518 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 RGS16O15492 202 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ITIH2P19823 946 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 STIP1P31948 543 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 BOLA3Q53S33 107 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 STK11IPQ8N1F8 1099 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TBCKQ8TEA7 893 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 C12orf42Q96LP6 360 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 CLIC6Q96NY7 704 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DRC3Q9H069 523 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 RABEP2Q9H5N1 569 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 GADD45BO75293 160 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TNNC2P02585 160 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 POLD2P49005 469 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TTI2Q6NXR4 508 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MTMR8Q96EF0 704 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 A1CFQ9NQ94 594 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PRMT7Q9NVM4 692 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 VPS54Q9P1Q0 977 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 CACNA1AO00555 2505 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 GOLGA8IPA6NC78 632 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PARNO95453 639 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 TROVE2P10155 538 aaKnown RBP eCLIP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ATP2B1P20020 1258 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.769e-6■■■■□ 23
SHPRH-205ENST00000433355 DCAF4L1Q3SXM0 396 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 C11orf57Q6ZUT1 292 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MICALL1Q8N3F8 863 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MAGEC3Q8TD91 643 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 NHEJ1Q9H9Q4 299 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PIH1D3Q9NQM4 214 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 FAM107AO95990 144 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 F9P00740 461 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 AXLP30530 894 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ETFBP38117 255 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 BCAMP50895 628 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DR1Q01658 176 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF33AQ06730 810 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ARL13BQ3SXY8 428 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF569Q5MCW4 686 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DRICH1Q6PGQ1 229 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 RSAD1Q9HA92 442 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms