RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 VSTM1Q6UX27 236 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PALB2Q86YC2 1186 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 TEX9Q8N6V9 391 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 CRAMP1Q96RY5 1269 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 ADAM33Q9BZ11 813 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 RNPEPL1Q9HAU8 725 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 ASIC3Q9UHC3 531 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 UBE4AQ14139 1066 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 EYA3Q99504 573 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 A0A0A6YYK5 440 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PODXLO00592 558 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 LIN7AO14910 233 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 CYP11B2P19099 503 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 EPHB2P29323 1055 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 CHRNA3P32297 505 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PRKCIP41743 596 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 PTGIRP43119 386 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 RPS6KA3P51812 740 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 KLC1Q07866 573 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 KCNA1Q09470 495 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 SUPT20HQ8NEM7 779 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 LZTS2Q9BRK4 669 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 DNAJC12Q9UKB3 198 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 COG5Q9UP83 839 aa12.42□□□□□ -0.42
HMGCS1-202ENST00000433297 SPAG7O75391 227 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 GCNT3O95395 438 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 GJB6O95452 261 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 DNAJC3Q13217 504 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 EPHA7Q15375 998 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 KNOP1Q1ED39 458 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 SEL1L2Q5TEA6 688 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TXLNGQ9NUQ3 528 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 O00370 1275 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 CBX6O95503 412 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 LMNB1P20700 586 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 PTDSS1P48651 473 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 ZDHHC14Q8IZN3 488 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 STK32AQ8WU08 396 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 C1orf54Q8WWF1 131 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 DNAJC9Q8WXX5 260 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 HAS1Q92839 578 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 RUNDC3BQ96NL0 473 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 LRRC37BQ96QE4 947 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TRIM4Q9C037 500 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 A0A1B0GVG6 124 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 THAP12O43422 761 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 GM2AP17900 193 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 VCAM1P19320 739 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 PEX5P50542 639 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 NPEPPSP55786 919 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TRAF1Q13077 416 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 KIAA1683Q9H0B3 1180 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 PCDHA2Q9Y5H9 948 aa12.41□□□□□ -0.42
HMGCS1-202ENST00000433297 GSTTP1A0A1W2PQM5 241 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 PEX11AO75192 247 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 TPBGLP0DKB5 382 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 SOX5P35711 763 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 MRPS35P82673 323 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 NBPF20Q3BBV1 942 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 APBB1IPQ7Z5R6 666 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-202ENST00000433297 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms