RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 TYRP1P17643 537 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 GALNSP34059 522 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 HSD17B7P56937 341 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 CACNB2Q08289 660 aaPredicted RBP6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 SFSWAPQ12872 951 aaKnown RBP6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 IQCB1Q15051 598 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 LMNTD2Q8IXW0 634 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 TNIP3Q96KP6 325 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 TTC1Q99614 292 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 CDX2Q99626 313 aaPredicted RBP6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 PSME4Q14997 1843 aa6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 SIPA1L3O60292 1781 aaPredicted RBP6.87□□□□□ -1.31
NIPAL3-205ENST00000432012 A0A096LPE4 126 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 USP27XA6NNY8 438 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 AHCYL1O43865 530 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 RESTQ13127 1097 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 HLTFQ14527 1009 aaKnown RBP eCLIP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ASIC2Q16515 512 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 RTL10Q7L3V2 364 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ZNF397Q8NF99 534 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 GTF3C6Q969F1 213 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 FSD1Q9BTV5 496 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ACAD8Q9UKU7 415 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 CFAP45Q9UL16 551 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 SYNPO2Q9UMS6 1093 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ANGEL1Q9UNK9 670 aaKnown RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 CEP131Q9UPN4 1083 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 TAF6LQ9Y6J9 622 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 PABPN1LA6NDY0 278 aaKnown RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 PHF20L1A8MW92 1017 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 CTAGE5O15320 804 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 FBXO21O94952 628 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 SKILP12757 684 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 MAGEA10P43363 369 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 STX1AQ16623 288 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 LONRF2Q1L5Z9 754 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 C11orf57Q6ZUT1 292 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 KRT222Q8N1A0 295 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 PPM1KQ8N3J5 372 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 RAET1EQ8TD07 263 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ZSCAN16Q9H4T2 348 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 SRRDQ9UH36 339 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 FEZ2Q9UHY8 353 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 HCN2Q9UL51 889 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 ZNF215Q9UL58 517 aaPredicted RBP6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 MYH15Q9Y2K3 1946 aa6.86□□□□□ -1.31
NIPAL3-205ENST00000432012 H3BQV1 296 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 JAK2O60674 1132 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ANXA1P04083 346 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 IMPDH2P12268 514 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 LACTBP83111 547 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 GRAPQ13588 217 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ABHD17CQ6PCB6 329 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 OR13H1Q8NG92 308 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 GRAPLQ8TC17 118 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TMEM40Q8WWA1 233 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 BRF1Q92994 677 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 EAF2Q96CJ1 260 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TM9SF2Q99805 663 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 PUS7LQ9H0K6 701 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ABCG4Q9H172 646 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 GIMAP2Q9UG22 337 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 DNM3Q9UQ16 869 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 MYO3BQ8WXR4 1341 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 DUOX1Q9NRD9 1551 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 RTL9Q8NET4 1388 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 SASH1O94885 1247 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 SNRPA1P09661 255 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 PYGMP11217 842 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 FOSL2P15408 326 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 CCZ1BP86790 482 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 CCZ1P86791 482 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 GRB10Q13322 594 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 KRT32Q14532 448 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 INPP5AQ14642 412 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TERF2Q15554 542 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 PRICKLE2Q7Z3G6 844 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ZNF589Q86UQ0 364 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ALYREFQ86V81 257 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 SLFN12Q8IYM2 578 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ATP6V1E2Q96A05 226 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 UNKQ9C0B0 810 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 ANKEF1Q9NU02 776 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TLR7Q9NYK1 1049 aaKnown RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 MAP3K2Q9Y2U5 619 aa6.85□□□□□ -1.31
NIPAL3-205ENST00000432012 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms